BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02250 (UTR included)
(4186 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B1A03 1396 0.0
BF01038B1G01 785 0.0
>BF01042B1A03
Length = 708
Score = 1396 bits (704), Expect = 0.0
Identities = 707/708 (99%)
Strand = Plus / Plus
Query: 2129 ggagaacaaataccttagcaccatggcaccaggcaaggtattcggagaactggcgatact 2188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagaacaaataccttagcaccatggcaccaggcaaggtattcggagaactggcgatact 60
Query: 2189 gtacaattgcaagagaactgccaccatcaaagccgctaccgactgcaggctctgggccat 2248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtacaattgcaagagaactgccaccatcaaagccgctaccgactgcaggctctgggccat 120
Query: 2249 cgagcgccaatgcttccagacaattatgatgagaactggtcttatcagacaggctgaata 2308
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 cgagcgccaatgcttccagacaattatgatgagaactggtcttatcagacaggcagaata 180
Query: 2309 cactgacttccttaagagtgtaccgatcttcaaaaaccttcccgaagacacccttatcaa 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cactgacttccttaagagtgtaccgatcttcaaaaaccttcccgaagacacccttatcaa 240
Query: 2369 aatatcagacgtattggaagaaacacactatcaaaatggcgactatattattagacaagg 2428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatatcagacgtattggaagaaacacactatcaaaatggcgactatattattagacaagg 300
Query: 2429 agccaggggtgataccttcttcattatatcaaagggacaagtcaaggtaacacagaagca 2488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agccaggggtgataccttcttcattatatcaaagggacaagtcaaggtaacacagaagca 360
Query: 2489 gccaaatagcaacgatgaaaaattcataagaactctaacgaaaggtgatttcttcgggga 2548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gccaaatagcaacgatgaaaaattcataagaactctaacgaaaggtgatttcttcgggga 420
Query: 2549 aaaggccttgcaaggagatgacctccgaacggcaaacatagtatgtgactccccagatgg 2608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaggccttgcaaggagatgacctccgaacggcaaacatagtatgtgactccccagatgg 480
Query: 2609 cactacatgcttagtaatagaccgggagaccttcaaccagcttatctcgacgctcgatga 2668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cactacatgcttagtaatagaccgggagaccttcaaccagcttatctcgacgctcgatga 540
Query: 2669 aatccgcaccaagtacaaggatgttggcgatgacaggcagagacttaatgaagaattcgc 2728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatccgcaccaagtacaaggatgttggcgatgacaggcagagacttaatgaagaattcgc 600
Query: 2729 aaacttgcggctatcagacctgcgcattatagcaaccttgggtattggtggttttggtcg 2788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaacttgcggctatcagacctgcgcattatagcaaccttgggtattggtggttttggtcg 660
Query: 2789 ggtggagcttgttcaaatccaaggagattccagccgatcgttcgccct 2836
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggtggagcttgttcaaatccaaggagattccagccgatcgttcgccct 708
>BF01038B1G01
Length = 901
Score = 785 bits (396), Expect = 0.0
Identities = 421/429 (98%), Gaps = 4/429 (0%)
Strand = Plus / Plus
Query: 3758 agttttatggttgtttacgacctaataaatttatttagacgttattctgctctgcttgga 3817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 agttttatggttgtttacgacctaataaatttatttagacgttattctgctctgcttgga 69
Query: 3818 atagaatgtagacaatatatctgaagttatggcattaattgttacgtacgttacagctga 3877
||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 70 atagaatgtagacaatacatctgaagttatggcatt----gttacgtacgttacagctga 125
Query: 3878 tgactttagattttgatgaacccttaagagacaattttaaattcattaaattgttttcaa 3937
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 126 tgactttagattttaatgaacccttaagagacaattctaaattcattaaattgttttcaa 185
Query: 3938 agattttatcaacgatttattattattattaaatatctcaacggagtatttataatttaa 3997
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 186 agattttatcaacgatttattattattattaaatgtctcaacggagtatttataatttaa 245
Query: 3998 taaatataaatcgaatacggcgttcacgttatcgtgaagtaagatatatctcacttagtt 4057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 taaatataaatcgaatacggcgttcacgttatcgtgaagtaagatatatctcacttagtt 305
Query: 4058 gttaaaaagcagtatttttctgtttgccattataatctttattagcgcttgccaagttac 4117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gttaaaaagcagtatttttctgtttgccattataatctttattagcgcttgccaagttac 365
Query: 4118 agatatatcgcaaatataatttacgaccagttaatgttgaattttattttgtttctgatt 4177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agatatatcgcaaatataatttacgaccagttaatgttgaattttattttgtttctgatt 425
Query: 4178 tagtattag 4186
|||||||||
Sbjct: 426 tagtattag 434
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 471,144
Number of extensions: 8810
Number of successful extensions: 8810
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8807
Number of HSP's successfully gapped: 2
Length of query: 4186
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4168
Effective length of database: 8,109,745
Effective search space: 33801417160
Effective search space used: 33801417160
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)