BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02271 (UTR included)
(1252 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1601_C1 1041 0.0
>BF14_1601_C1
Length = 1004
Score = 1041 bits (525), Expect = 0.0
Identities = 540/544 (99%), Gaps = 2/544 (0%)
Strand = Plus / Plus
Query: 553 aggtgttcagtcgccacggcctggaggtggtttctcctctccgggagaagttcgacccca 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aggtgttcagtcgccacggcctggaggtggtttctcctctccgggagaagttcgacccca 522
Query: 613 accttcacgaggctctcttcacgcaggaggtccagggagcggagccggggtccgtggtgg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 accttcacgaggctctcttcacgcaggaggtccagggagcggagccggggtccgtggtgg 582
Query: 673 cggtcagcaaggtcggctacaagctgaggggtcgctgtgtgaggccggcgctggtcgggg 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cggtcagcaaggtcggctacaagctgaggggtcgctgtgtgaggccggcgctggtcgggg 642
Query: 733 tcgccaagggagcctcctagtggcgccggcgctcctcgcactcgttaaataccaaattat 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tcgccaagggagcctcctagtggcgccggcgctcctcgcactcgttaaataccaaattat 702
Query: 793 attttaatatttgtctggtgactgggtgatgtgcatattatgaaaattgtgtgttgtctc 852
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 attttaatatttgtccggtgactgggtgatgtgcatattatgaaaattgtgtgttgtctc 762
Query: 853 ggcatgtagcgtactgcggacccagcttggtagtattcagacctcagtacggggagcgtg 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ggcatgtagcgtactgcggacccagcttggtagtattcagacctcagtacggggagcgtg 822
Query: 913 gtgcgacactcctcagtactgtcccttgtaagtgcagcacaattaatatgtttagtaatc 972
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 823 ttgcgacactcctcagtactgtcccttgtaagtgcagcacaatta--atgtttagtaatc 880
Query: 973 tttgtcacagtcagcgtcagcgtctcgtctgtgaagagcatttatttatcagtttctaaa 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 tttgtcacagtcagcgtcagcgtctcgtctgtgaagagcatttatttatcagtttctaaa 940
Query: 1033 tcaatccgcgttgaatgtccgtatgttttatatattttagtactagaattaaagtggagc 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 tcaatccgcgttgaatgtccgtatgttttatatattttagtactagaattaaagtggagc 1000
Query: 1093 attg 1096
||||
Sbjct: 1001 attg 1004
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 143,343
Number of extensions: 2832
Number of successful extensions: 2832
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2831
Number of HSP's successfully gapped: 1
Length of query: 1252
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1235
Effective length of database: 8,119,229
Effective search space: 10027247815
Effective search space used: 10027247815
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)