BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02272 (UTR included)
(2050 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_163_C3 2464 0.0
BF01019B1A07 605 e-172
BF01019B2B05 321 2e-87
>BF14_163_C3
Length = 1538
Score = 2464 bits (1243), Expect = 0.0
Identities = 1273/1283 (99%)
Strand = Plus / Plus
Query: 457 atggtagtttataaactgaactgcacatagtttaaacgagcatcatgggacagcagacgt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atggtagtttataaactgaactgcacatagtttaaacgagcatcatgggacagcagacgt 315
Query: 517 cgaggaagagcggggagtgtagctgcggctgcggcgcctgggagagacggagagagggag 576
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 316 cgaggaagagcggtgagtgtagctgcggctgcggcgcctgggagagacgaagagagggag 375
Query: 577 actcgcccagcagtgttcatagatacgtgagtgcagtcacggacagatggagcgggcgag 636
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 376 actcgcccagcagtgttcatagatacgtgagtgcagtcaccgacagatggagcgggcgag 435
Query: 637 agtgcgcgtgtcgccggagacggtggaggcgcccggcctgtgtgtgcaccgcctacagac 696
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agtgcgcctgtcgccggagacggtggaggcgcccggcctgtgtgtgcaccgcctacagac 495
Query: 697 gagtcagcgacgcctgccacgacgatagactagcggccgtccttacactgggagcgagag 756
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 496 gagtcagcgacgcctgccacgacgacagactagcggccgtccttacactgggagcgagag 555
Query: 757 atctcaggagagagctggacgccatagtcattaacacagacggtgacactggcagagacc 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atctcaggagagagctggacgccatagtcattaacacagacggtgacactggcagagacc 615
Query: 817 atggggagcccacagctgaggtctatgtcctgtccgtcggtccgaggagtgacacagact 876
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 acggggagcccacagctgaggtctatgtcctgtccgtcggtccgaggagtgacacagact 675
Query: 877 ccacccccgagggtcgagctactgagctggtgcaggccagcgatcagtctataaggaggt 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ccacccccgagggtcgagctactgagctggtgcaggccagcgatcagtctataaggaggt 735
Query: 937 tccaggtggtgtgtggcggcgagctccgcgcgcttctcctccgctgcccgctcccgcccg 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tccaggtggtgtgtggcggcgagctccgcgcgcttctcctccgctgcccgctcccgcccg 795
Query: 997 ccctcgtgccgcccactgtacacacacaggtcgactacaaacactgtctagtgccggacc 1056
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ccctcgtgccgcccaccgtacacacacaggtcgactacaaacactgtctagtgccggacc 855
Query: 1057 tgcaggagatcacggcttgctcgttctactgggggaagatggaccgctatgaggcggaga 1116
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 856 tgcaggagatcacggcttgctcgttctactgggggaagatggaccgctacgaggcggaga 915
Query: 1117 gactcctggaaaacaagcccgagggcacgttcctgctccgcgactcggcccaggaggagc 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 gactcctggaaaacaagcccgagggcacgttcctgctccgcgactcggcccaggaggagc 975
Query: 1177 acctgttctcggtgtcgttccgtaagtacggccggtcgctccacgcccgcatcgagcact 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 acctgttctcggtgtcgttccgtaagtacggccggtcgctccacgcccgcatcgagcact 1035
Query: 1237 accaacatcggttcagcttcgactctcacgaccccggggtgttcgccgcccccacggtca 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 accaacatcggttcagcttcgactctcacgaccccggggtgttcgccgcccccacggtca 1095
Query: 1297 ccggtctcatagaacactacaaggacccggcctgcgtgatgttcttcgagccgatgctga 1356
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 ccggcctcatagaacactacaaggacccggcctgcgtgatgttcttcgagccgatgctga 1155
Query: 1357 cggctcctctgccgcgcagctctcctttctctctgcagcagttgtcgcgggcggtgatcg 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 cggctcctctgccgcgcagctctcctttctctctgcagcagttgtcgcgggcggtgatcg 1215
Query: 1417 tctctcacgtgagctacgacggcgtggaacacctcccgctgccggcccgcctgagggcct 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1216 tctctcacgtgagctacgacggcgtggaacacctcccgctgccggcccgcctgagggcct 1275
Query: 1477 tcctcaaggagtaccattaccggcaacgcgtccgcgtccgccgcctggagagcgactcgt 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1276 tcctcaaggagtaccattaccggcaacgcgtccgcgtccgccgcctggagagcgactcgt 1335
Query: 1537 acgagcgagcctagcgaccgctctaccacctgccaccgctggagtacctgccccggctgc 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1336 acgagcgagcctagcgaccgctctaccacctgccaccgctggagtacctgccccggctgc 1395
Query: 1597 tgcacccgcgctgagccccagggctcccgtgaaggacgtggatggtgtgtggttatccta 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1396 tgcacccgcgctgagccccagggctcccgtgaaggacgtggatggtgtgtggttatccta 1455
Query: 1657 acatagttggaagtgataaaactgggcttacctaacgttagatgtaaatatatgatatac 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1456 acatagttggaagtgataaaactgggcttacctaacgttagatgtaaatatatgatatac 1515
Query: 1717 cgttactatgagtattaacatag 1739
||||||||| |||||||||||||
Sbjct: 1516 cgttactattagtattaacatag 1538
>BF01019B1A07
Length = 457
Score = 605 bits (305), Expect = e-172
Identities = 372/402 (92%)
Strand = Plus / Plus
Query: 526 gcggggagtgtagctgcggctgcggcgcctgggagagacggagagagggagactcgccca 585
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 56 gcggggagtgtagctgcggctgcggcgcctgggagagacgaagagagggagactcgccca 115
Query: 586 gcagtgttcatagatacgtgagtgcagtcacggacagatggagcgggcgagagtgcgcgt 645
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 116 gcagtgttcatagatacgtgagtgcagtcacggacagatggagcgggcgagagtgcgcct 175
Query: 646 gtcgccggagacggtggaggcgcccggcctgtgtgtgcaccgcctacagacgagtcagcg 705
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gtcgcccgnnnnnntggaggcgcccggcctgtgtgtgcaccgcctacagacgagtcagcg 235
Query: 706 acgcctgccacgacgatagactagcggccgtccttacactgggagcgagagatctcagga 765
||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||
Sbjct: 236 acgcctgccacgacgatagactagcggccgtccttnnnctgggagcgnnnnatctcatga 295
Query: 766 gagagctggacgccatagtcattaacacagacggtgacactggcagagaccatggggagc 825
| || | |||| | |||| |||||||||||||||||||||||||||| || ||||
Sbjct: 296 gnnagnngnacgcnannnncatttacacagacggtgacactggcagagaccacggagagc 355
Query: 826 ccacagctgaggtctatgtcctgtccgtcggtccgaggagtgacacagactccacccccg 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ccacagctgaggtctatgtcctgtccgtcggtccgaggagtgacacagactccacccccg 415
Query: 886 agggtcgagctactgagctggtgcaggccagcgatcagtcta 927
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agggtcgagctactgagctggtgcaggccagcgatcagtcta 457
>BF01019B2B05
Length = 573
Score = 321 bits (162), Expect = 2e-87
Identities = 165/166 (99%)
Strand = Plus / Plus
Query: 457 atggtagtttataaactgaactgcacatagtttaaacgagcatcatgggacagcagacgt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atggtagtttataaactgaactgcacatagtttaaacgagcatcatgggacagcagacgt 318
Query: 517 cgaggaagagcggggagtgtagctgcggctgcggcgcctgggagagacggagagagggag 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cgaggaagagcggggagtgtagctgcggctgcggcgcctgggagagacggagagagggag 378
Query: 577 actcgcccagcagtgttcatagatacgtgagtgcagtcacggacag 622
|||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 379 actcgcccagcagtgttcatagatacgtgagtgcagtcaccgacag 424
Score = 143 bits (72), Expect = 1e-33
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 618 gacagatggagcgggcgagagtgcgcgtgtcgccggagacggtggaggcgcccggcctgt 677
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 496 gacagatggagcgggcgagagtgcgcgtgtcgccggnnacggtggaggcgcccggcctgt 555
Query: 678 gtgtgcaccgcctacaga 695
||||||||||||||||||
Sbjct: 556 gtgtgcaccgcctacaga 573
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,450
Number of extensions: 8493
Number of successful extensions: 8493
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8493
Number of HSP's successfully gapped: 5
Length of query: 2050
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2033
Effective length of database: 8,119,229
Effective search space: 16506392557
Effective search space used: 16506392557
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)