BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02277 (UTR included)
(2602 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1914_C1 1495 0.0
BF01004X1C11 892 0.0
>BF14_1914_C1
Length = 774
Score = 1495 bits (754), Expect = 0.0
Identities = 769/774 (99%)
Strand = Plus / Plus
Query: 368 aagcgacgtgtctcggaactgatagagtcgtaaacaaaaataagatgttgttacagtagt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagcgacgtgtctcggaactgatagagtcgtaaacaaaaataagatgttgttacagtagt 60
Query: 428 gtaaattgcacattgtgttatgtccggagtaaagttctatgttctgggaggtggacgatg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtaaattgcacattgtgttatgtccggagtaaagttctatgttctgggaggtggacgatg 120
Query: 488 gcgggaggtggatatgtcgtctggtcttgtggagggctgggggccagcgcggttcctggt 547
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgggaggtagatatgtcgtctggtcttgtggagggctgggggccagcgcggttcctggt 180
Query: 548 ggcccgcgggggtcggctaagggctcagcggcgagcccccgtgttgagagggttacgggc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcccgcgggggtcggctaagggctcagcggcgagcccccgtgttgagagggttacgggc 240
Query: 608 actggcggttggcaggcctaccaccgtacatgatggaccgacgctctctcagatcagata 667
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 241 actggcggttggcaggcctaccaccgtacatgatggaccgatgctctctcagatcagata 300
Query: 668 cgacacggtctccaaaccgaagccccgtcccgcccgccggcagctctgcgacccctgtca 727
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgacacggtcgccaaaccgaagccccgtcccgcccgccggcagctctgcgacccctgtca 360
Query: 728 cgtcccatgccacgctctgtgtcgtccgcaacactacgggtgcggtcacaacccggtgta 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtcccatgccacgctctgtgtcgtccgcaacactacgggtgcggtcacaacccggtgta 420
Query: 788 caacgaacaggcgttcgcactccccgcggccggtccgcgagtctcacacgcctcggtaca 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caacgaacaggcgttcgcactccccgcggccggtccgcgagtctcacacgcctcggtaca 480
Query: 848 ggctgacctcacaccagacaggcagagcaaccaagatggccgacacaagaccgaggaggc 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggctgacctcacaccagacaggcagagcaaccaagatggccgacacaagaccgaggaggc 540
Query: 908 gacgcggagagacaaggccgacacctcacacggagcaaagaacaccgagatcaagatcac 967
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gacgcggagagataaggccgacacctcacacggagcaaagaacaccgagatcaagatcac 600
Query: 968 tcacaggacacgacatgaccgacggcagactcgggcgcgtagcgacaggaagacgtgtca 1027
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 601 tcacaggacacgacatgaccgacggcagacacgggcgcgtagcgacaggaagacgtgtca 660
Query: 1028 ctcggaggaggagccggagagcaagaggaaacggagggagggaggagggggcggagtgtg 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctcggaggaggagccggagagcaagaggaaacggagggagggaggagggggcggagtgtg 720
Query: 1088 caaggaactgatcattaccgaggaggacgtgctgctgttgagagacttcctagt 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caaggaactgatcattaccgaggaggacgtgctgctgttgagagacttcctagt 774
>BF01004X1C11
Length = 567
Score = 892 bits (450), Expect = 0.0
Identities = 468/474 (98%)
Strand = Plus / Minus
Query: 1897 gtacggtagtgctccgctcccgcgccgtcccgcgcgtgtcccgcacgccgacctacgacg 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtacggtagtgctccgctcccgcgccgtcccgcgcgtgtcccgcacgccgacctacgacg 422
Query: 1957 aactcacgaggagattcaacgagcgacacgcacccgactcggactcgtcggtgacggagc 2016
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 421 aactcacgaggagattcaacgagcgacacgcacccgactcggactcgtcggtcacggagc 362
Query: 2017 gccgcgcctcccggagactgcgcgccgaccgcgccgcagccccgcataaggcgcacgcga 2076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gccgcgcctcccggagactgcgcgccgaccgcgccgcagccccgcataaggcgcacgcga 302
Query: 2077 ggcgcctctacagccacgcccaatgaccgatacttatatcacattttttttcttcattac 2136
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 301 ggcgcctctacagccacgcccaatgaccgatacttagatcacattttgtttcttcattac 242
Query: 2137 ttttcagtaaatttatttcaaaacttaatatatttaaagcgatctctctgcagtttttgt 2196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttcagtaaatttatttcaaaacttaatatatttaaagcgatctctctgcagtttttgt 182
Query: 2197 ccttaccgcaagtccgtattctcaaactgcatacaacctacgccgttactatcaagtgtg 2256
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 ccttaccgcaagtccgtattctcaacctgcatacaacctacgccgttactatcaagtgtg 122
Query: 2257 tggtttgaggaacgcgtggtaaggttgctgactgactcgggatgagtgtatgccactaag 2316
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 tggtttgaggaacgcgtggtaaggctgctgactgactcgggatgagtgtatgccactaag 62
Query: 2317 tgtttcgttgtacttgtaattatgttagtgtattgaatgttcgaataaacaaat 2370
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 tgtttcgttgtacttgtaattatgttagtgtattgaatgttccaataaacaaat 8
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,384
Number of extensions: 4926
Number of successful extensions: 4926
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4926
Number of HSP's successfully gapped: 2
Length of query: 2602
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2585
Effective length of database: 8,119,229
Effective search space: 20988206965
Effective search space used: 20988206965
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)