BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02328 (UTR included)
(1522 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_473_C3 1294 0.0
BF14_473_C1 902 0.0
BF14_473_C2 206 8e-53
>BF14_473_C3
Length = 1554
Score = 1294 bits (653), Expect = 0.0
Identities = 667/671 (99%), Gaps = 3/671 (0%)
Strand = Plus / Plus
Query: 377 gctcttcggattggccgtcatcgggatcggagtggctgttctactcaactggtcggtgat 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gctcttcggattggccgtcatcgggatcggagtggctgttctactcaactggtcggtgat 208
Query: 437 cagagaggagttgaacggtcacctgtccgtggcgccatggctgttcatagtgattggagc 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cagagaggagttgaacggtcacctgtccgtggcgccatggctgttcatagtgattggagc 268
Query: 497 tgtcatgttcgtgatagcgttcttcggatgctgcggtgccatccgggagagccattgcat 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgtcatgttcgtgatagcgttcttcggatgctgcggtgccatccgggagagccattgcat 328
Query: 557 ggttgttacttacgcgatcttcctcctcgtgatcatcatcgtccaagtaattctggctgt 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggttgttacttacgcgatcttcctcctcgtgatcatcatcgtccaagtaattctggctgt 388
Query: 617 gctgttgtttacgaacggggactctatcaaagaggggctcgtcaaaaccatgaacacgct 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gctgttgtttacgaacggggactctatcaaagaggggctcgtcaaaaccatgaacacgct 448
Query: 677 ctacaacaagggtaccactgacgctgcatccaggactgtctttaacaacttggaacaaca 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ctacaacaagggtaccactgacgctgcatccaggactgtctttaacaacttggaacaaca 508
Query: 737 gttgcaatgctgcggcaagaacggtccatcggactacggtctactggagctgcccaagtc 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gttgcaatgctgcggcaagaacggtccatcggactacggtctactggagctgcccaagtc 568
Query: 797 ttgttgctcgaacgttgggacactaggaaaggtgctcggtaacagttgcacgctcgtgga 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttgttgctcgaacgttgggacactaggaaaggtgctcggtaacagttgcacgctcgtgga 628
Query: 857 cgccaacactgagggctgttcctcccgcgtggctgacctctttgagaaatggagcaaacc 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cgccaacactgagggctgttcctcccgcgtggctgacctctttgagaaatggagcaaacc 688
Query: 917 tatcgctggggtttccattgggatagcttgtgttgag---ctcggagcgctgttctcgct 973
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 689 tatcgctggggtttccattgggatagcttgtgttgaggtcgtcggagcgctgttctcgct 748
Query: 974 gtgcctcgccaactctatcaggaacatggacagaaggtctcgctactaatattttgtatt 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gtgcctcgccaactctatcaggaacatggacagaaggtctcgctactaatattttgtatt 808
Query: 1034 agacctggtac 1044
|||||||||||
Sbjct: 809 agacctggtac 819
>BF14_473_C1
Length = 895
Score = 902 bits (455), Expect = 0.0
Identities = 472/477 (98%), Gaps = 3/477 (0%)
Strand = Plus / Plus
Query: 538 tccgggagagccattgcatggttgttacttacgcgatcttcctcctcgtgatcatcatcg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tccgggagagccattgcatggttgttacttacgcgatcttcctcctcgtgatcatcatcg 66
Query: 598 tccaagtaattctggctgtgctgttgtttacgaacggggactctatcaaagaggggctcg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tccaagtaattctggctgtgctgttgtttacgaacggggactctatcaaagaggggctcg 126
Query: 658 tcaaaaccatgaacacgctctacaacaagggtaccactgacgctgcatccaggactgtct 717
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tcaaaacgatgaacacgctctacaacaagggtaccactgacgctgcatccaggactgtct 186
Query: 718 ttaacaacttggaacaacagttgcaatgctgcggcaagaacggtccatcggactacggtc 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ttaacaacttggaacaacagttgcaatgctgcggcaagaacggtccatcggactacggtc 246
Query: 778 tactggagctgcccaagtcttgttgctcgaacgttgggacactaggaaaggtgctcggta 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tactggagctgcccaagtcttgttgctcgaacgttgggacactaggaaaggtgctcggta 306
Query: 838 acagttgcacgctcgtggacgccaacactgagggctgttcctcccgcgtggctgacctct 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 acagttgcacgctcgtggacgccaacactgagggctgttcctcccgcgtggctgacctct 366
Query: 898 ttgagaaatggagcaaacctatcgctggggtttccattgggatagcttgtgttgag---c 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttgagaaatggagcaaacctatcgctggggtttccattgggatagcttgtgttgaggtcg 426
Query: 955 tcggagcgctgttctcgctgtgcctcgccaactctatcaggaacatggacagaaggt 1011
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tcggagcgctgttctcgctgtgcctcgccaactctatcaggaacatggacagaaggt 483
>BF14_473_C2
Length = 1279
Score = 206 bits (104), Expect = 8e-53
Identities = 110/112 (98%)
Strand = Plus / Plus
Query: 1411 gacgcaataacagatttgtataattcactttcacagtctgtggtcatcccgtggttaaca 1470
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacgcactatcagatttgtataattcactttcacagtctgtggtcatcccgtggttaaca 60
Query: 1471 agctttgagatatgttttaatgttcttgtaatatgacacagataataaatat 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agctttgagatatgttttaatgttcttgtaatatgacacagataataaatat 112
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,217
Number of extensions: 5746
Number of successful extensions: 5746
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5744
Number of HSP's successfully gapped: 3
Length of query: 1522
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1505
Effective length of database: 8,119,229
Effective search space: 12219439645
Effective search space used: 12219439645
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)