BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02347 (UTR included)
(1624 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058A2A05 1417 0.0
>BF01058A2A05
Length = 892
Score = 1417 bits (715), Expect = 0.0
Identities = 736/741 (99%), Gaps = 2/741 (0%)
Strand = Plus / Plus
Query: 360 aaagacat-cgttgatttactttattgccttattttaaataacatttttacattattata 418
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aaagacatacgttgatttactttattgccttattttaaataacatttttacattattata 72
Query: 419 gctgcgtttttacccattaaaatacgttcaattac-tagtttttgtaaaacatatattat 477
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 73 gctgcgtttttacccattaaaatacgttcaattnnntagtttttgtaaaacatatattat 132
Query: 478 agtaaccgagcacattggtgaaaatggttgtagtttcttcgacatttgctgcgccggtcg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agtaaccgagcacattggtgaaaatggttgtagtttcttcgacatttgctgcgccggtcg 192
Query: 538 aaggtgtgttatttcagagtccatccactaagttactcgtcaacgaccaggaattaggca 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aaggtgtgttatttcagagtccatccactaagttactcgtcaacgaccaggaattaggca 252
Query: 598 ccgccactttatatatcactgaaaataatgttgtttggggcggtggcgtcagtacttctg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ccgccactttatatatcactgaaaataatgttgtttggggcggtggcgtcagtacttctg 312
Query: 658 gagttgcagcgcctaccatatcgctcctgtatcctagtatatcactgcacgcggtccaga 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gagttgcagcgcctaccatatcgctcctgtatcctagtatatcactgcacgcggtccaga 372
Query: 718 gggaaccgtcgccggccttgtatatggttctaaattacgaactaagacttccagaattaa 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gggaaccgtcgccggccttgtatatggttctaaattacgaactaagacttccagaattaa 432
Query: 778 tccagcaaggtagtggtgatgctccgagtaatgaagacgatgatgatgatgatgagtttg 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tccagcaaggtagtggtgatgctccgagtaatgaagacgatgatgatgatgatgagtttg 492
Query: 838 atgctgacgatcaacccatcacacagttgagattcataccgcagaatgaggcagatttaa 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atgctgacgatcaacccatcacacagttgagattcataccgcagaatgaggcagatttaa 552
Query: 898 atccaatgtattcagccatgatacaaggacaggctctacaccccgacccggctgacgagg 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 atccaatgtattcagccatgatacaaggacaggctctacaccccgacccggctgacgagg 612
Query: 958 tggacgaagacccttatatggatggagaggattttgatgatgatgaagagtttgaagatg 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tggacgaagacccttatatggatggagaggattttgatgatgatgaagagtttgaagatg 672
Query: 1018 ctgaagagagtggacctcaggaagccatggacggtctgaggaagatgggactcgggaaca 1077
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 673 ctgaagagagtggacctcaggaggccatggacggtctgaggaagatgggactcgggaaca 732
Query: 1078 gtaacggcacacattttgaag 1098
|||||||||||||||||||||
Sbjct: 733 gtaacggcacacattttgaag 753
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 220,910
Number of extensions: 4949
Number of successful extensions: 4949
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4942
Number of HSP's successfully gapped: 1
Length of query: 1624
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1607
Effective length of database: 8,119,229
Effective search space: 13047601003
Effective search space used: 13047601003
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)