BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02349 (UTR included)
(1735 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B1H12 367 e-101
>BF01043B1H12
Length = 728
Score = 367 bits (185), Expect = e-101
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 1048 acacaagcttcaggaacgatcacagtcgagctcggatcccagaagacccgatgcaatggt 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 acacaagcttcaggaacgatcacagtcgagctcggatcccagaagacccgatgcaatggt 71
Query: 1108 cggttcagcacgtccgtctgtggatacagtgggctgttcggcagttttcactgatgggtt 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cggttcagcacgtccgtctgtggatacagtgggctgttcggcagttttcactgatgggtt 131
Query: 1168 tgaagctagctgattggagtctcaccggtgcggaactgtgtgaagtcaccaatgttgaat 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tgaagctagctgattggagtctcaccggtgcggaactgtgtgaagtcaccaatgttgaat 191
Query: 1228 tcaag 1232
|||||
Sbjct: 192 tcaag 196
Score = 99.6 bits (50), Expect = 1e-20
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 1682 ttcaggaaaaaagtgccttcggatcccggggatctattttggacgcattttgaa 1735
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttcaagaaaaaagtgccttcggatcccggggatctattttggacgcattttgaa 244
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,864
Number of extensions: 10151
Number of successful extensions: 10151
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10151
Number of HSP's successfully gapped: 2
Length of query: 1735
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1718
Effective length of database: 8,119,229
Effective search space: 13948835422
Effective search space used: 13948835422
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)