BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02366 (UTR included)
(2065 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_278_C1 1403 0.0
>BF14_278_C1
Length = 1224
Score = 1403 bits (708), Expect = 0.0
Identities = 721/724 (99%), Gaps = 1/724 (0%)
Strand = Plus / Plus
Query: 1343 gcagttctcgttgcactgtcccgggaaccccatatataatctgtacgctgtgtccaacca 1402
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 gcagttctcgttgcactgtcccgggaaccccatatataatctgtacgccgtgtccaacca 60
Query: 1403 ctacggaaccatggagggcggacactatacagcctactgtaaaagtagcgtttacggcaa 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctacggaaccatggagggcggacactatacagcctactgtaaaagtagcgtttacggcaa 120
Query: 1463 atggtacaaattcgacgaccacctcgtgtcggagatgtcgtcaggcgaggtccgctcttc 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggtacaaattcgacgaccacctcgtgtcggagatgtcgtcaggcgaggtccgctcttc 180
Query: 1523 cgccgcctacatcctgttctactcggcctgtaagccttcctgagactgaggaactcggtc 1582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgccgcctacatcctgttctactcggcctgtaagccttcctgagactgaggaactcggtc 240
Query: 1583 aggactggcgactgtgatgctacgtcacatcctgtactagagacagagaaccgctaaggt 1642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggactggcgactgtgatgctacgtcacatcctgtactagagacagagaaccgctaaggt 300
Query: 1643 cttcaacaaactagaagcggtcattccccagtcttttatactgaacacgactcatatata 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcaacaaactagaagcggtcattccccagtcttttatactgaacacgactcatatata 360
Query: 1703 cttgtacaatattaaaattttccttactaccagaacttactatacatctatatt-aaaaa 1761
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 361 cttgtacaatattaaaattttccttactaccagaacttactatacatctatattaaaaaa 420
Query: 1762 aaaccgtcagaaacctgtgttcctgtaacttgatgtaactaaacataaaaggaaggtagt 1821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaccgtcagaaacctgtgttcctgtaacttgatgtaactaaacataaaaggaaggtagt 480
Query: 1822 tcggtgttccacttctagtgtaaaacatttaaaacagtatttttgtttatcagatttaca 1881
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccgtgttccacttctagtgtaaaacatttaaaacagtatttttgtttatcagatttaca 540
Query: 1882 aaatgaaattagttatacttaaaatttataattaaattcgcctctagcatttaaatgtat 1941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaatgaaattagttatacttaaaatttataattaaattcgcctctagcatttaaatgtat 600
Query: 1942 tttcgtttgatcataaaatatttgatcggcaacctaccatgttgtgatttgatgtaacac 2001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttcgtttgatcataaaatatttgatcggcaacctaccatgttgtgatttgatgtaacac 660
Query: 2002 atagctcctaagttgatcgtgaccgcctctaatattatatgaaaatataaatatttagtt 2061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atagctcctaagttgatcgtgaccgcctctaatattatatgaaaatataaatatttagtt 720
Query: 2062 gctg 2065
||||
Sbjct: 721 gctg 724
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,099
Number of extensions: 5749
Number of successful extensions: 5749
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5748
Number of HSP's successfully gapped: 1
Length of query: 2065
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2048
Effective length of database: 8,119,229
Effective search space: 16628180992
Effective search space used: 16628180992
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)