BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02388 (UTR included)
(2296 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B1C07 1463 0.0
>BF01042B1C07
Length = 813
Score = 1463 bits (738), Expect = 0.0
Identities = 763/770 (99%), Gaps = 1/770 (0%)
Strand = Plus / Plus
Query: 1521 aggaggctgcatgtttgggatctatcgaagattggtgaggaacagacggctgaggacgcg 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaggctgcatgtttgggatctatcgaagattggtgaggaacagacggctgaggacgcg 60
Query: 1581 gaggacgggcccccggaactgttgttcatccacggaggtcacaccgccaagatatccgac 1640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaggacgggcccccggaactgttgttcatccacggaggtcacaccgccaagatatccgac 120
Query: 1641 ttctcatggaaccccaacgagccgtgggtcatctgctccgtctccgaggacaacatcatg 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctcatggaaccccaacgagccgtgggtcatctgctccgtctccgaggacaacatcatg 180
Query: 1701 caggtgtggcaaatggctgagaacatctacaacgatgaggaaccggaaacgccggcttcg 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggtgtggcaaatggctgagaacatctacaacgatgaggaaccggaaacgccggcttcg 240
Query: 1761 gagctggaatcgggagtcaacgtgaaccacggttagcgctcccacagcggcaagggagcg 1820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagctggaatcgggagtcaacgtgaaccacggttagcgctcccacagcggcaagggagcg 300
Query: 1821 ccaggccttcgccccacgcacctctatgttgatagtaatgcattatgttaattgcggcat 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccaggccttcgccccacgcacctctatgttgatagtaatgcattatgttaattgcggcat 360
Query: 1881 cgaatcagttctgaaacagataattagtttgtaaattgttcggctgaactttgaaattct 1940
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgaatcggttctgaaacagataattagtttgtaaattgttcggctgaactttgaaattct 420
Query: 1941 gtgtttatatttaggatctagtgttaaggaataaaaaagtttgatggaacaatcttaatg 2000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgtttatatttaggatctagtgttaaggaataaaaaagtttgatggaacaatcttaatg 480
Query: 2001 attaaaattcgtttataaaatttatcggtgtaaataataatttttaaatgataaaatttg 2060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attaaaattcgtttataaaatttatcggtgtaaataataatttttaaatgataaaatttg 540
Query: 2061 cttagtggccacgttctgtgttgctgtaataaaagtcaccatacaactatattatttagt 2120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 541 cttagtggccacgttctgtgttgctgtaataaaattcaccatacaactatattatttagt 600
Query: 2121 ataccaaataacctgccagcctttcgtgaatcaaaatttttctaaattcgctcaaattat 2180
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 601 ataccaaataacctgccagcctctcgtgaatcaaaatttttctaaattcgctcaaaatat 660
Query: 2181 atgggaccactctcaaaaaataaatactgatacatctcagataatata-tttttttcgac 2239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 661 atgggaccactctcaaaaaataaatactgatacatctcagataatatattttttttcaac 720
Query: 2240 ttaacttcaatttcaaagcgatttaaaacatacattactagtaatataag 2289
|||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 721 ttaacttcaatttcaaagcgatttaaaacatacattactagttatataag 770
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 286,559
Number of extensions: 7134
Number of successful extensions: 7134
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7133
Number of HSP's successfully gapped: 1
Length of query: 2296
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2279
Effective length of database: 8,119,229
Effective search space: 18503722891
Effective search space used: 18503722891
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)