BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02411 (UTR included)
(1918 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A1F12 1263 0.0
>BF01042A1F12
Length = 805
Score = 1263 bits (637), Expect = 0.0
Identities = 667/678 (98%)
Strand = Plus / Plus
Query: 1 gcttaaatactaatataccaaacggcagtaaatcattgttcgaaaaacacgacgatttat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 128 gcttaaatactaatataccaaacggcagtaaatcattgttcgaaaaacacaacgatttat 187
Query: 61 ttttatttcaacatattaatgcgtttaccaatgtcaacatacgctattacgacggcttac 120
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 188 ttttatttcaacatattaatgcgattaccaatatcaacatacgctattacgacggcttac 247
Query: 121 cgaataaaatatgcccacagtgcctgcaacagttagaatgtgctattgtttttaagacga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cgaataaaatatgcccacagtgcctgcaacagttagaatgtgctattgtttttaagacga 307
Query: 181 aatgtgagtcatctaacgaaaaattaaaaaaaaattgttgcccgactgaattgaaattaa 240
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 308 aatgtgagtcatctaacgaaaaattaaaaaaaaattgtttcccgaatgaattgaaattaa 367
Query: 241 aatcagagtgttttgtattaattaaaaaagaggatatttatcaatctgatataaaattag 300
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 368 aaacagagtgttttgtattaattaaaaaagaggatatttatcaatctgacataaaattag 427
Query: 301 aggatgaatgtataaatgaagttttctcccccgttatttgtatagaacaaatacctaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aggatgaatgtataaatgaagttttctcccccgttatttgtatagaacaaatacctaaga 487
Query: 361 cagaagataatgcaaaaaaagttgctagtcttgcaagctgtcgcaaaagtagagcaatag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 488 cagaagataatgcaaaaaaagttgctagtcttgcaagctgtcgcaaaagtagggcaatag 547
Query: 421 atcttaaactggagtgtcatgactgtggagaaacctttaaatctaaatgtaaattgagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atcttaaactggagtgtcatgactgtggagaaacctttaaatctaaatgtaaattgagtg 607
Query: 481 ttcattggaaaaaaacccatatgcttactaatctgatatgtacaacctgtaagaggacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ttcattggaaaaaaacccatatgcttactaatctgatatgtacaacctgtaagaggacat 667
Query: 541 ttaaaagctataaggcgtatcatatgcataagaagaggaaaagcaaaagttgtgttgtag 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 668 ttaaaagctataaggcgtatcatatgcataagaagaggaaaagcnnnagttgtgttgtag 727
Query: 601 cacaagatgagaatgttaatatagaaggagttggtaagacacgcaaatttgtctgcaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cacaagatgagaatgttaatatagaaggagttggtaagacacgcaaatttgtctgcaaaa 787
Query: 661 tatgcaattacgtaactc 678
||||||||||||||||||
Sbjct: 788 tatgcaattacgtaactc 805
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,119
Number of extensions: 7258
Number of successful extensions: 7258
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7258
Number of HSP's successfully gapped: 1
Length of query: 1918
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1901
Effective length of database: 8,119,229
Effective search space: 15434654329
Effective search space used: 15434654329
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)