BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02475 (UTR included)
(2438 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B1A12 1576 0.0
>BF01062B1A12
Length = 850
Score = 1576 bits (795), Expect = 0.0
Identities = 838/851 (98%), Gaps = 1/851 (0%)
Strand = Plus / Minus
Query: 1538 gtcagataaatttgaaaagcaatatgcatataacataagatataattatggcaaagaagg 1597
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 850 gtcagataaatttgaaaagcaatatgcatataacgtaagatataattatggcaaagaagg 791
Query: 1598 cagtaagaaaaactatgcaccattaaattgtttaaaaattatcaacaccaatgttggacc 1657
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 790 cagtaagaaaaactatgcaccatttaattgtttaaaaattatcaacaccaatgttggacc 731
Query: 1658 tggtgaatgtcatggctgcccatttagacacagcgacttaaatgttctgaagaataagtt 1717
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 730 tggtgaatgtcatggctgcccatttagacacagcgacttaaacattctgaagaataagtt 671
Query: 1718 aaaaggctatggactggaaggtcaagcagccaatgatattgtagatatgactaaaaaggg 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aaaaggctatggactggaaggtcaagcagccaatgatattgtagatatgactaaaaaggg 611
Query: 1778 tcattaccagattgcttgcagcaaatattttgatgcgattcacaacacagatcttggcat 1837
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 610 tcattaccagattgcctgcagcaaatattttgatgcgatccacaacacagatcttggcat 551
Query: 1838 aggaataaatcacccaaatcaatattttgaagaaagccaaaaactaattaaaggtgatgt 1897
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 550 aggaataaatcacccaaatcaatattttgaagaaagccaaaaactaattaaaggcgattt 491
Query: 1898 caagttggaacccaaaaaagaaactaaatctagtaatattaacataaaaaaagaagaatg 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 caagttggaacccaaaaaagaaactaaatctagtaatattaacataaaaaaagaagaatg 431
Query: 1958 tttagaagatatggattttgaagagatcaccgaatgaaaagaataacagaacatggttgg 2017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tttagaagatatggattttgaagagatcaccgaatgaaaagaataacagaacatggttgg 371
Query: 2018 aaatttattaataattactattatttacaattaaaatatcactattttctctttatatac 2077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaatttattaataattactattatttacaattaaaatatcactattttctctttatatac 311
Query: 2078 atagccctttttgtcatacgaccacaatatagaccaaatataaaaattaagcccacaatg 2137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atagccctttttgtcatacgaccacaatatagaccaaatataaaaattaagcccacaatg 251
Query: 2138 gatatccctacaactagaaaatatttcttagacggtgaagatgatatttcagtgtagaca 2197
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gatatccctacaactagaaaatatttcttagacggtgaagatgatatttcagtgtagacg 191
Query: 2198 tctcccaaattttcgattacatttacctgaaaaaaaaagttctgattaatataaagtatg 2257
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 190 tctcccaaattttcgattacatttacctgaaaa-aaaagttctgattaatataaagtatg 132
Query: 2258 tatatgttaccaagtactaagtggtttagatatgtacatagatagtttaaatcactcaat 2317
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tatatgttaccaagttctaagtggtttagatatgtacatagatagtttaaatcactcaat 72
Query: 2318 gaaatcttaatagtttttttttttgtattttagtactataattctttgtttgtaactaaa 2377
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 71 gaaatcttaatagtttttttttttgtattttagtactataattgttcgtttgtaactaaa 12
Query: 2378 tatttataaaa 2388
|||||||||||
Sbjct: 11 tatttataaaa 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 417,846
Number of extensions: 9795
Number of successful extensions: 9795
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9794
Number of HSP's successfully gapped: 1
Length of query: 2438
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2421
Effective length of database: 8,119,229
Effective search space: 19656653409
Effective search space used: 19656653409
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)