BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02499 (UTR included)
(2140 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B2G07 1007 0.0
>BF01020B2G07
Length = 782
Score = 1007 bits (508), Expect = 0.0
Identities = 533/543 (98%)
Strand = Plus / Plus
Query: 486 taggctggcctcaaaatgatgaatcaagaaattatgtgtgaagttgagattggaacacac 545
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 taggctggcctcaaaatgatgaatcaagaaattatgtgtgaagttgagattggaacacat 299
Query: 546 gatggcatggtcgagatagatgtggatgaacaggtcggcgttaagtatgaagaaattgag 605
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gatggcatggtcgaaatagatgtggatgaacaggtcggcgttaagtatgaagaaattgag 359
Query: 606 acgggtcagtacgaggaatatataaccgatgatcagtatgaagaggttgaggaacaggtt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 acgggtcagtacgaggaatatataaccgatgatcagtatgaagaggttgaggaacaggtt 419
Query: 666 atcggtatgcagcatttagaggaagttggcagcgaggaggttatactgccagggatatcc 725
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 attggtatgcagcatttagaggaagttggcagcgaggaggttatactgccagggatatcc 479
Query: 726 gaggaggttctacataatgatgcgacctacgacaatgtgtaccagcctcccggaaacagc 785
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 480 gaggaggttctacataatgatgcgacctacgacaatgtgtaccagcctctcggaaacagc 539
Query: 786 agaagaggtcgtggcaggccgagagtgaacgcctccaacaacatacaccatttgatgcca 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agaagaggtcgtggcaggccgagagtgaacgcctccaacaacatacaccatttgatgcca 599
Query: 846 ataggtgaagtacccatgggtctcatggagaacaattcaggacgtgctgctcgtagatgg 905
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 600 ataggtgaagtacccatgggtctcatggagaacagttcaggacgtgctgctcgtagatgg 659
Query: 906 gaacagaaacaggtccagatcaaaacaatggagggagagttctcagtcaccatgtgggcc 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gaacagaaacaggtccagatcaaaacaatggagggagagttctcagtcaccatgtgggcc 719
Query: 966 accggagaggatgacgatgacggatcgaaccccgaacccgatcctgattacaccgagtac 1025
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 accggnnnnnatgacgatgacggatcgaaccccgaacccgatcctgattacaccgagtac 779
Query: 1026 atg 1028
|||
Sbjct: 780 atg 782
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,457
Number of extensions: 5536
Number of successful extensions: 5536
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5536
Number of HSP's successfully gapped: 1
Length of query: 2140
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2123
Effective length of database: 8,119,229
Effective search space: 17237123167
Effective search space used: 17237123167
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)