BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02519 (UTR included)
(1227 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1988_C1 749 0.0
>BF14_1988_C1
Length = 876
Score = 749 bits (378), Expect = 0.0
Identities = 384/386 (99%)
Strand = Plus / Plus
Query: 192 agatatctcaaggatttatgtgtctatggtgtaacgaagccggcaaaaccttttactcca 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agatatctcaaggatttatgtgtctatggtgtaacgaagccggcaaaaccttttactcca 550
Query: 252 tggaggcagctagagctcacatgatagataaaggacactgtaaaatgctgcatgaaggtc 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tggaggcagctagagctcacatgatagataaaggacactgtaaaatgctgcatgaaggtc 610
Query: 312 ttgccctagctgaatattcagactattatgactatagtgcatcatatcctgacaatgaag 371
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttgccctagctgaatattcggactattatgactatagtgcatcatatcctgacaatgaag 670
Query: 372 atggcgagaatatggatgtggatgaggaagttgaaggtcctacaccattggaaacaagta 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atggcgagaatatggatgtggatgaggaagttgaaggtcctacaccattggaaacaagta 730
Query: 432 atttagaactggtactgccatcaggcatcacagttggacatcggtcacttatgaaatatt 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 atttagaactggtactgccatcaggcatcacagttggacatcggtcacttatgaaatatt 790
Query: 492 acaagcaaaatctgtcttatgatagtcaggctttagtaaagaaatctgaccgcaaactgc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 acaagcaaaatctgtcttatgatagtcaggctttagtaaagaaatctgaccgcaaactgc 850
Query: 552 atcgtgttctaggagtttatagggca 577
||||||||||||||||||| ||||||
Sbjct: 851 atcgtgttctaggagtttacagggca 876
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 233,964
Number of extensions: 22562
Number of successful extensions: 22562
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22562
Number of HSP's successfully gapped: 1
Length of query: 1227
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1210
Effective length of database: 8,119,229
Effective search space: 9824267090
Effective search space used: 9824267090
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)