BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02534 (UTR included)
(1963 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A1H02 72 4e-12
>BF01054A1H02
Length = 850
Score = 71.9 bits (36), Expect = 4e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1881 aaattgattttgaaggaattgttagt-tttctttaagacaaactttattgaaattactta 1939
||||||||||| ||||| || | ||| |||||||||||||||||||||| | ||||||||
Sbjct: 134 aaattgatttttaaggatttttcagtgtttctttaagacaaactttattaacattactta 193
Query: 1940 caagtcacaatt 1951
|||| |||||||
Sbjct: 194 caagccacaatt 205
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,483
Number of extensions: 4799
Number of successful extensions: 4799
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4798
Number of HSP's successfully gapped: 1
Length of query: 1963
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1946
Effective length of database: 8,119,229
Effective search space: 15800019634
Effective search space used: 15800019634
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)