BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02544 (UTR included)
(1630 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 176 7e-44
BF01019A1H08 117 6e-26
BF01043B1E03 90 1e-17
BF01044B1A07 86 2e-16
BF01017A1F03 86 2e-16
BF01056B2D01 80 1e-14
BF01016B1E06 80 1e-14
BF14_335_C5 72 3e-12
BF01014B2F02 70 1e-11
>BF14_335_C2
Length = 1827
Score = 176 bits (89), Expect = 7e-44
Identities = 145/163 (88%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 825 agaggtataacggctaaatctctctacatcgtactaaaagacttgggcctgtccagaact 884
||||||||||| |||||||||||||||| | |||||||| ||||||||||||||||||||
Sbjct: 1106 agaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaact 1047
Query: 885 aatattaattcattcttggaaagtacttcggagacagccctagtaggttcttttcaaatt 944
|| | | ||||||||| ||| |||||||| ||||||| ||||||||||| |||||||||
Sbjct: 1046 aacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaatt 987
Query: 945 tggttggatagagaggggagcttggacggtggaggtgagcgtt 987
||||| | ||||| |||||||||||||||||||||||||||
Sbjct: 986 tggttag---gagagaggagcttggacggtggaggtgagcgtt 947
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 996 gcaccgttgaagctcctctccctgcaaagcgatggagccgacacccgcacgttgaatcca 1055
|||| |||||||||||||||||||||| ||| ||| ||| |||||||||| ||||||||
Sbjct: 891 gcactgttgaagctcctctccctgcaacgcggcggacccggcacccgcacggtgaatcca 832
Query: 1056 ttgaatgctaagaggtttcgt 1076
| ||| |||||||||||||||
Sbjct: 831 tagaaagctaagaggtttcgt 811
>BF01019A1H08
Length = 504
Score = 117 bits (59), Expect = 6e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 996 gcaccgttgaagctcctctccctgcaaagcgatggagccgacacccgcacgttgaatcca 1055
|||| |||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||
Sbjct: 447 gcactgttgaagctcctctccctgcaacgcgatggacccggcacccgcacggtgaatcca 388
Query: 1056 ttgaatgctaagaggtttc 1074
|||||||||||||||||||
Sbjct: 387 ttgaatgctaagaggtttc 369
>BF01043B1E03
Length = 830
Score = 89.7 bits (45), Expect = 1e-17
Identities = 131/159 (82%), Gaps = 3/159 (1%)
Strand = Plus / Plus
Query: 826 gaggtataacggctaaatctctctacatcgtactaaaagacttgggcctgtccagaacta 885
|||||||||| ||| ||||||||||| | |||| ||| ||||| ||||| |||||||||
Sbjct: 213 gaggtataacagcttcatctctctacaacctactgaaacacttgagcctgcccagaacta 272
Query: 886 atattaattcattcttggaaagtacttcggagacagccctagtaggttcttttcaaattt 945
| || || |||||||||||| ||||| | || ||| || |||||| ||||||||||
Sbjct: 273 acatcaaatcattcttggaacgtactgcaaaggcaggcc---taggtttgtttcaaattt 329
Query: 946 ggttggatagagaggggagcttggacggtggaggtgagc 984
|||| | ||||||| ||| ||||||| ||||||||||||
Sbjct: 330 ggttaggtagagagaggaccttggacagtggaggtgagc 368
>BF01044B1A07
Length = 806
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 1001 gttgaagctcctctccctgcaaagcgatggagccgacacccgcacgttgaatccattgaa 1060
|||||||||||||||||||| | |||||||| ||| |||||||||| |||||||||||||
Sbjct: 505 gttgaagctcctctccctgccacgcgatggacccgccacccgcacggtgaatccattgaa 446
Query: 1061 tgctaagaggtttcg 1075
||| ||| ||||||
Sbjct: 445 cgctgagaagtttcg 431
>BF01017A1F03
Length = 782
Score = 85.7 bits (43), Expect = 2e-16
Identities = 109/130 (83%), Gaps = 2/130 (1%)
Strand = Plus / Plus
Query: 863 agacttgggcctgtccagaactaatattaattcattcttggaaagtacttcggag--aca 920
||||||| ||| ||||| |||||| || ||||||||||||||| ||||||| || ||
Sbjct: 116 agacttgagccagtccaaaactaacatcaattcattcttggaacgtacttccaaggcgca 175
Query: 921 gccctagtaggttcttttcaaatttggttggatagagaggggagcttggacggtggaggt 980
||||||||| || |||| || |||||| ||||||||| ||||||| |||||||||||
Sbjct: 176 gccctagtacattagtttctaagttggttagatagagagaggagcttccacggtggaggt 235
Query: 981 gagcgtttaa 990
||||||||||
Sbjct: 236 gagcgtttaa 245
>BF01056B2D01
Length = 728
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 1001 gttgaagctcctctccctgcaaagcgatggagccgacacccgcacgttgaatccattgaa 1060
|||||||||||||||||||||| | |||||| ||| |||||||||| ||||| ||| |||
Sbjct: 154 gttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtgaattcatggaa 95
Query: 1061 tgctaagaggtttcgt 1076
|| | |||||||||||
Sbjct: 94 tgttgagaggtttcgt 79
>BF01016B1E06
Length = 606
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 935 ttttcaaatttggttggatagagaggggagcttggacggtggaggtgagcgtttaa 990
||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||
Sbjct: 324 ttttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaa 269
>BF14_335_C5
Length = 1597
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 953 tagagaggggagcttggacggtggaggtgagcgtttaatacgcg 996
||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 1441 tagagagaggagcttggacggtggaggtgagcgtttaatgcgcg 1484
>BF01014B2F02
Length = 623
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 1003 tgaagctcctctccctgcaaagcgatggagccgacacccgcacgttgaatccattgaatg 1062
|||||||||||||||||||| || |||| ||| |||||||||| || ||||| ||||||
Sbjct: 593 tgaagctcctctccctgcaacgc--tggacccggcacccgcacggtgcatccactgaatg 536
Query: 1063 ctaagaggtttcgt 1076
|| |||||||||||
Sbjct: 535 ctgagaggtttcgt 522
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 277,389
Number of extensions: 7052
Number of successful extensions: 7052
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 7050
Number of HSP's successfully gapped: 11
Length of query: 1630
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1613
Effective length of database: 8,119,229
Effective search space: 13096316377
Effective search space used: 13096316377
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)