BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02546 (UTR included)
(1402 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B2H04 1211 0.0
>BF01030B2H04
Length = 715
Score = 1211 bits (611), Expect = 0.0
Identities = 620/623 (99%)
Strand = Plus / Plus
Query: 495 gcgaaaatggagaaatctggtaacccgccgccgtatgtgtggggaaatgcccacaccatg 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gcgaaaatggagaaatctggtaacccgccgccgtatgtgtggggaaatgcccacaccatg 152
Query: 555 cagcctcccccggcagccccgccgagctattcccaagctgtgggtggtgttggtccttcc 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cagcctcccccggcagccccgccgagctattcccaagctgtgggtggtgttggtccttcc 212
Query: 615 agcccctacacccctctttacccacccacttctggaccagccattgttacaacagtagtg 674
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 213 agcccctacacccctctttacccacccacttctggaccagccattgtcacaacagtagtg 272
Query: 675 ccagtgggtcctcaacctacacatatgatctgccccagttgtcattctgagatgaacaca 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ccagtgggtcctcaacctacacatatgatctgccccagttgtcattctgagatgaacaca 332
Query: 735 gacactcaaacgaaaccagggctcattgcatatgtgtgcggagctatcatatttgctctg 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gacactcaaacgaaaccagggctcattgcatatgtgtgcggagctatcatatttgctctg 392
Query: 795 ggtggattcttaggttgctgtttgattccctgctgtatagacagttgtatggatgttcat 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggtggattcttaggttgctgtttgattccctgctgtatagacagttgtatggatgttcat 452
Query: 855 cacaagtgccccaactgtggagcctatctcggacgctatcgaagataaattttatcaaaa 914
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 453 cacaagtgccccaactgtggagcctatctcggacgctatcgacgataaattttatcaaaa 512
Query: 915 ttgtttcatctacatggaaaacgtgaatctctttgtcgtaaaatctgaaaaaatctctgt 974
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 513 ttgtttcatctacatggaaaacgtgaatctctttgttgtaaaatctgaaaaaatctctgt 572
Query: 975 atgtgttaaaatactctcatcacatttataaaaatccagttcattatttttactgccatc 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 atgtgttaaaatactctcatcacatttataaaaatccagttcattatttttactgccatc 632
Query: 1035 tagactgaataagtgtaaatcttcctttaaaatctttccattatagatgtttaatatgaa 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tagactgaataagtgtaaatcttcctttaaaatctttccattatagatgtttaatatgaa 692
Query: 1095 acaaacttcttttgctatatcac 1117
|||||||||||||||||||||||
Sbjct: 693 acaaacttcttttgctatatcac 715
Score = 184 bits (93), Expect = 3e-46
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 191 ttgttacgaagtcttataaatataattgttaaataaaaaaataaataagtgtgattcttc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgttacgaagtcttataaatataattgttaaataaaaaaataaataagtgtgattcttc 60
Query: 251 ttagacaagacagttgttataaatataactgtg 283
|||||||||||||||||||||||||||||||||
Sbjct: 61 ttagacaagacagttgttataaatataactgtg 93
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 206,205
Number of extensions: 4605
Number of successful extensions: 4605
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4603
Number of HSP's successfully gapped: 2
Length of query: 1402
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1385
Effective length of database: 8,119,229
Effective search space: 11245132165
Effective search space used: 11245132165
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)