BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02549 (UTR included)
(2572 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025A1F03 1292 0.0
>BF01025A1F03
Length = 671
Score = 1292 bits (652), Expect = 0.0
Identities = 665/671 (99%)
Strand = Plus / Plus
Query: 518 cagacatcttcctcatgtcaagacagttgacttatgcaggaacaagataactaagttgac 577
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 cagacatcttcctcatgtcaagacagtcgacttatgcaggaacaagataactaagttgac 60
Query: 578 ggaagaagattttaaagacattcaagaagtggaacacttgcttgttgctgataatcagat 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaagaagattttaaagacattcaagaagtggaacacttgcttgttgctgataatcagat 120
Query: 638 atcaaagattgaaagacatgcaatacctaaacggttaaagcacgctcatcttggtgtcaa 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcaaagattgaaagacatgcaatacctaaacggttaaagcacgctcatcttggtgtcaa 180
Query: 698 caaactaaactctttaaacggagctctgcgtgatttagatagtttggattggatatttat 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaactaaactctttaaacggagctctgcgtgatttagatagtttggattggatatttat 240
Query: 758 aaacgctaatcatttaaagtccattgataacgaacttcctgtgaaggctaaaaagattgt 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaacgctaatcatttaaagtccattgataacgaacttcctgtgaaggctaaaaagattgt 300
Query: 818 tctcatacacgctgcacacaacgagcttacgaacctaccaaaagatcttcgacaaatgcc 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctcatacacgctgcacacaacgagcttacgaacctaccaaaagatcttcgacaaatgcc 360
Query: 878 gtccctggagtctttgtacttttacgataacaatataaagtcacttgatggtgctttaca 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtccctggagtctttgtacttttacgataacaatataaagtcacttgatggtgctttaca 420
Query: 938 aaaatcgagaagattaaagacaataagtttatctttcaataagattgaatcactagctga 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaatcgagaagattaaagacaataagtttatctttcaataagattgaatcactagctga 480
Query: 998 agatgagttttctgaagcagaaatgttagcagatttagatatcggctataatcagttaag 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agatgagttttctgaagcagaaatgttagcagatttagatatcggctataatcagttaag 540
Query: 1058 atctttaaatggctccttaagagccttaagatcacttcgatatctgaacttgactcacaa 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atctttaaatggctccttaagagccttaagatcacttcgatatctgaacttgactcacaa 600
Query: 1118 ttttcttactgaattttctttacaagaaatcaaaggcttaaggggattagccgttattga 1177
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 601 ttttcttactgaattttctttacannnnntcaaaggcttaaggggattagccgttattga 660
Query: 1178 cctttctcata 1188
|||||||||||
Sbjct: 661 cctttctcata 671
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,383
Number of extensions: 6704
Number of successful extensions: 6704
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6704
Number of HSP's successfully gapped: 1
Length of query: 2572
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2555
Effective length of database: 8,119,229
Effective search space: 20744630095
Effective search space used: 20744630095
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)