BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02570 (UTR included)
(2107 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3461_C1 1637 0.0
>BF14_3461_C1
Length = 875
Score = 1637 bits (826), Expect = 0.0
Identities = 865/877 (98%), Gaps = 2/877 (0%)
Strand = Plus / Plus
Query: 521 atctcccagaaccccggttttacctaaaaaagaggataaagaggaatcattttgggataa 580
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atctcccagaaccccggtt--acctaaaaaagaggataaagaggaatcattttgggataa 58
Query: 581 aatcggcacaattggtcgtaaaaagcgcataaaggaagttcaggaagttcaagcagaagg 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 aatcggcacaattggtcgtaaaaagcgcataaaggaagttcaggaagttcaagcagaagg 118
Query: 641 caaatatgctattgattcacctggaagtcctacagctccagaaattcctcctgaggagta 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 caaatatgctattgattcacctggaagtcctacagctccagaaattcctcctgaggagta 178
Query: 701 cagcctgttggacaatgaagaaagagcgatcattgagccccgctctcttgaagatccgag 760
||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||
Sbjct: 179 cagcctgttggacaatgaagaaagagcaatcattgagccccgctctcttgaagacccaag 238
Query: 761 agtgaaagacttaattcaggtcttgattgactggatcaatgatgaattagctgcacagag 820
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 239 agtgaaagacttaattcaggtcttgatagactggatcaatgatgaattagctgcacagag 298
Query: 821 aattattgtgaaagacattagtgaggatctctacgacggtcaggtgttacagaagctgtt 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aattattgtgaaagacattagtgaggatctctacgacggtcaggtgttacagaagctgtt 358
Query: 881 ggaaaaactgacagagacgaagttggatgtcccagaagttacacaatctgaagagggcca 940
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ggaaaaactgacagagacaaagttggatgtcccagaagttacacaatctgaagagggcca 418
Query: 941 gcgtcaaaagctcgctatagttctgagagctgtcaatagggtcatctatggaacttcaaa 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcgtcaaaagctcgctatagttctgagagctgtcaatagggtcatctatggaacttcaaa 478
Query: 1001 gccagtacagaagtggagtgtggattcgattcattcaaagaatgttgtgtccattttgca 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gccagtacagaagtggagtgtggattcgattcattcaaagaatgttgtgtccattttgca 538
Query: 1061 tttgttggtagcgcttgctcgctatttccgcgcaccggtccgtctgccagaaaacgttag 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tttgttggtagcgcttgctcgctatttccgcgcaccggtccgtctgccagaaaacgttag 598
Query: 1121 tgtcaacgtggttgttgtgaagaaggatgcgcccaaccagctctcccataggacttatat 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tgtcaacgtggttgttgtgaagaaggatgcgcccaaccagctctcccataggacttatat 658
Query: 1181 tgaagatataacaaccacttatgatgaccttggtatgaagtgcgagagggatgctttcga 1240
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 659 agaagatataacgaccacttacgatgaccttggtatgaagtgcgagagggatgctttcga 718
Query: 1241 cgcactatttgaccacgcccccgacaaactgcaagttgttaaaaaatcactaatcacatt 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 cgcactatttgaccacgcccccgacaaactgcaagttgttaaaaaatcactaatcacatt 778
Query: 1301 cgttaataaacacctcagtaaagtgaatctcgaagttatggatctcgatagtcagttcca 1360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 779 cgttaataaacacctcagtaaagtgaatctcgaagttatggatctcgatagtcaattcca 838
Query: 1361 cgatggtgtgtaccttgtactgcttatgggcctactg 1397
||||||||||||||||||| |||||||||||||||||
Sbjct: 839 cgatggtgtgtaccttgtattgcttatgggcctactg 875
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 282,038
Number of extensions: 5842
Number of successful extensions: 5842
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5841
Number of HSP's successfully gapped: 1
Length of query: 2107
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2090
Effective length of database: 8,119,229
Effective search space: 16969188610
Effective search space used: 16969188610
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)