BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02575 (UTR included)
(1188 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 153 8e-37
BF14_335_C2 123 7e-28
BF01044B1A07 109 1e-23
BF01056B2D01 105 2e-22
BF14_335_C4 105 2e-22
BF01014B2F02 100 1e-20
BF01016A2B02 86 1e-16
BF01049B1F01 84 6e-16
BF01045B1A06 78 4e-14
BF14_335_C5 78 4e-14
>BF01019A1H08
Length = 504
Score = 153 bits (77), Expect = 8e-37
Identities = 89/93 (95%)
Strand = Plus / Plus
Query: 345 acctctcagcgttcaatgcattcaccgtgcgagtgccgggtccatcgcgttgcagggaga 404
|||||| ||| ||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 372 acctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttgcagggaga 431
Query: 405 ggagcttcaacagtgcctgggagttgcgaccca 437
|||||||||||||||||||||||||||||||||
Sbjct: 432 ggagcttcaacagtgcctgggagttgcgaccca 464
>BF14_335_C2
Length = 1827
Score = 123 bits (62), Expect = 7e-28
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 337 gagacgagacctctcagcgttcaatgcattcaccgtgcgagtgccgggtccatcgcgttg 396
||||||| |||||| ||| ||| ||| |||||||||||| ||||||||||| |||||||
Sbjct: 808 gagacgaaacctcttagctttctatggattcaccgtgcgggtgccgggtccgccgcgttg 867
Query: 397 cagggagaggagcttcaacagtgcctgggagttgcgac 434
|||||||||||||||||||||||||||||| |||||||
Sbjct: 868 cagggagaggagcttcaacagtgcctgggatttgcgac 905
>BF01044B1A07
Length = 806
Score = 109 bits (55), Expect = 1e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 348 tctcagcgttcaatgcattcaccgtgcgagtgccgggtccatcgcgttgcagggagagga 407
||||||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 438 tctcagcgttcaatggattcaccgtgcgggtggcgggtccatcgcgtggcagggagagga 497
Query: 408 gcttcaacagtgcctggga 426
|||||||| ||| ||||||
Sbjct: 498 gcttcaactgtgtctggga 516
>BF01056B2D01
Length = 728
Score = 105 bits (53), Expect = 2e-22
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 338 agacgagacctctcagcgttcaatgcattcaccgtgcgagtgccgggtccatcgcgttgc 397
|||||| |||||||| | ||| ||| |||||||||||| |||||||||||||| | ||||
Sbjct: 77 agacgaaacctctcaacattccatgaattcaccgtgcgggtgccgggtccatcacattgc 136
Query: 398 agggagaggagcttcaacagtgcctggga 426
|||||||||||||||||||| ||||||||
Sbjct: 137 agggagaggagcttcaacagcgcctggga 165
>BF14_335_C4
Length = 1491
Score = 105 bits (53), Expect = 2e-22
Identities = 90/101 (89%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 337 gagacgagacctctcagcgttcaatgcattcaccgtgcgagtgccgggtccatcgcgttg 396
||||||| | |||||||| ||| ||| |||||||||||| ||| ||| |||||||||||
Sbjct: 1364 gagacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttg 1305
Query: 397 cagggagaggagcttcaacagtgcctgggagttgcgaccca 437
|||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 1304 cagg-agaggagcttcaacagtgcctgggacttgcgaccca 1265
>BF01014B2F02
Length = 623
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/101 (88%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 337 gagacgagacctctcagcgttcaatgcattcaccgtgcgagtgccgggtccatcgcgttg 396
||||||| |||||||||| |||| || || ||||||||| |||||||||||| ||||||
Sbjct: 519 gagacgaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtcca--gcgttg 576
Query: 397 cagggagaggagcttcaacagtgcctgggagttgcgaccca 437
||||||||||||||||| ||| |||| ||| ||||||||||
Sbjct: 577 cagggagaggagcttcagcagcgcctaggacttgcgaccca 617
>BF01016A2B02
Length = 780
Score = 85.7 bits (43), Expect = 1e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 364 attcaccgtgcgagtgccgggtccatcgcgttgcagggagaggagcttcaacagtgcctg 423
||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 197 attcaccgtgct-gtgccgggtcccgcgcgttgaagggagaggagcttcaacagtgcctg 255
Query: 424 ggagttgcgac 434
||| |||||||
Sbjct: 256 ggaattgcgac 266
>BF01049B1F01
Length = 840
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 392 cgttgcagggagaggagcttcaacagtgcctgggagttgcgaccca 437
||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgaccca 632
>BF01045B1A06
Length = 820
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 364 attcaccgtgcgagtgccgggtccatcgcgttgcagggagaggagcttcaacagtgcct 422
||||||| |||| |||| |||||||| | ||||||||||||||||||||||||||||||
Sbjct: 682 attcaccatgcgggtgcggggtccattgtgttgcagggagaggagcttcaacagtgcct 740
>BF14_335_C5
Length = 1597
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/70 (90%), Gaps = 2/70 (2%)
Strand = Plus / Minus
Query: 364 attcaccgtgcgagtgccgggtccatcgcgttgcagggagaggagcttcaacagtgcctg 423
|||||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||||
Sbjct: 1584 attcaccgtgcgggtgccgggtgcatct--ttgcacggagaggagcttcaacagtgcctg 1527
Query: 424 ggagttgcga 433
||| ||||||
Sbjct: 1526 ggacttgcga 1517
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 118,157
Number of extensions: 2711
Number of successful extensions: 2711
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2708
Number of HSP's successfully gapped: 10
Length of query: 1188
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1171
Effective length of database: 8,119,229
Effective search space: 9507617159
Effective search space used: 9507617159
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)