BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02613 (UTR included)
(3454 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2003_C1 1203 0.0
>BF14_2003_C1
Length = 1620
Score = 1203 bits (607), Expect = 0.0
Identities = 655/669 (97%), Gaps = 9/669 (1%)
Strand = Plus / Plus
Query: 2786 aggctacgatcaaatcccgatagactcaatgcaggggttggacatcggaagcggtttcaa 2845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aggctacgatcaaatcccgatagactcaatgcaggggttggacatcggaagcggtttcaa 395
Query: 2846 tatggacatggacatcggcgaggagggcgccactaccaacgagctagcctttcctgaacc 2905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tatggacatggacatcggcgaggagggcgccactaccaacgagctagcctttcctgaacc 455
Query: 2906 gccgcacgacaacaacaacgtagccgcctggtacgacaccgacctctagagggtgacctc 2965
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 456 gccgcacgacaacaacaacgtagccgcctggtacgacaccgacctctagaggg--acct- 512
Query: 2966 tagagggcttatctggacattttaattacttgacacccgtgtaacactattgagttaagt 3025
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 513 -----ggcttatctggacattttaagtacttgacacccgtgtaacactattgagtaaagt 567
Query: 3026 ttacttaatgtaataattttgtagagtaaactgatgtattgacttcttgtcataacaaac 3085
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 568 tgacttaatgtaataattttgtagagtaaactgatatattgacttcttgtcataacaaac 627
Query: 3086 aactcgtcaactatattaaaacctcacttcgagtgtaattatcggttataaaagctttct 3145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aactcgtcaactatattaaaacctcacttcgagtgtaattatcggttataaaagctttct 687
Query: 3146 aaacatatgtaatgaaaattcaactagttactagtttttgtttatgtcaaaatatatata 3205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aaacatatgtaatgaaaattcaactagttactagtttttgtttatgtcaaaatatatata 747
Query: 3206 aaaaaaattatgttttattcacaatattttattatcacaaaataattaaatataaaacaa 3265
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aaaaaaat-atgttttattcacaatattttattatcacaaaataattaaatataaaacaa 806
Query: 3266 ttcgttaccaaaatcacgaacagaacgccatcgatcctcaacttctgtgatagtctcacg 3325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttcgttaccaaaatcacgaacagaacgccatcgatcctcaacttctgtgatagtctcacg 866
Query: 3326 acgtaacaattctaacatctgttataaaattggaagcgatgggtgctatacctgggtcgg 3385
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 867 acgtaacaattctaacatctgttataaaattggaagcgatgggtgctatacctggctcgg 926
Query: 3386 tattgtatttctaaacgaacaaacgccccggcattggttacatcgggttttgtacgggaa 3445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 tattgtatttctaaacgaacaaacgccccggcattggttacatcgggttttgtacgggaa 986
Query: 3446 cgtatgaaa 3454
|||||||||
Sbjct: 987 cgtatgaaa 995
Score = 587 bits (296), Expect = e-167
Identities = 302/304 (99%)
Strand = Plus / Plus
Query: 2484 gctgataaagagggagcggaaatgatagaagcagagggagccaccgcacccctcactgaa 2543
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgataaagagggcgcggaaatgatagaagcagagggagccaccgcacccctcactgaa 60
Query: 2544 ctactgcattcaaggaatgaaggtgtggctacatacgccgcagctgttctgttccgcatg 2603
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 ctactgcattcaaggaatgaaggtgtagctacatacgccgcagctgttctgttccgcatg 120
Query: 2604 tcagaagacaaacctcacgactacaagaagagactctctatggagttgacgaattcgctg 2663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcagaagacaaacctcacgactacaagaagagactctctatggagttgacgaattcgctg 180
Query: 2664 ttcagagacgatcatcagatgtggcccagcgacctcgccatgcaacccgacctacaggac 2723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcagagacgatcatcagatgtggcccagcgacctcgccatgcaacccgacctacaggac 240
Query: 2724 atgctcggaccggaacagggctacgaaggtctatacggcacgagaccatctttccaccaa 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgctcggaccggaacagggctacgaaggtctatacggcacgagaccatctttccaccaa 300
Query: 2784 caag 2787
||||
Sbjct: 301 caag 304
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 334,115
Number of extensions: 6353
Number of successful extensions: 6353
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6352
Number of HSP's successfully gapped: 3
Length of query: 3454
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3436
Effective length of database: 8,109,745
Effective search space: 27865083820
Effective search space used: 27865083820
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)