BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN02625 (UTR included)
         (1159 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01049B2H03                                                           88   4e-17
BF01058A1C03                                                           70   9e-12
BF01052B1F12                                                           68   3e-11

>BF01049B2H03
          Length = 832

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                        
Query: 1065 taatgaggtctcagactttcgcgagtattcatttaaatgaaactaatatttttcggataa 1124
            ||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 354  taatgagatctaagattttagcgagtattcatttaaatgaaactaatatttttcggatta 295

                
Query: 1125 ctaa 1128
            ||||
Sbjct: 294  ctaa 291


>BF01058A1C03
          Length = 779

 Score = 69.9 bits (35), Expect = 9e-12
 Identities = 35/35 (100%)
 Strand = Plus / Minus

                                               
Query: 1082 ttcgcgagtattcatttaaatgaaactaatatttt 1116
            |||||||||||||||||||||||||||||||||||
Sbjct: 523  ttcgcgagtattcatttaaatgaaactaatatttt 489


>BF01052B1F12
          Length = 785

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                              
Query: 1090 tattcatttaaatgaaactaatatttttcggata 1123
            ||||||||||||||||||||||||||||||||||
Sbjct: 323  tattcatttaaatgaaactaatatttttcggata 356


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,080
Number of extensions: 7904
Number of successful extensions: 7904
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7904
Number of HSP's successfully gapped: 3
Length of query: 1159
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1142
Effective length of database: 8,119,229
Effective search space: 9272159518
Effective search space used: 9272159518
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)