BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02644 (UTR included)
(3586 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A1D03 1481 0.0
>BF01026A1D03
Length = 763
Score = 1481 bits (747), Expect = 0.0
Identities = 760/763 (99%), Gaps = 1/763 (0%)
Strand = Plus / Plus
Query: 1035 ttcgagcctacaaaatggccgatactggatctaccctccaactccgatgacggcgagggg 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcgagcctacaaaatggccgatactggatctaccctccaactccgatgacggcgagggg 60
Query: 1095 caggagaagaacgagagagacgaacacacagacagacacgacgcggacgcggagagaata 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caggagaagaacgagagagacgaacacacagacagacacgacgcggacgcggagagaata 120
Query: 1155 cacggagcgcgacacgaggagccggagcagaagactggacacgaggagcggccagcggag 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacggagcgcgacacgaggagccggagcagaagactggacacgaggagcggccagcggag 180
Query: 1215 cgggaccaggccgcgcatgctgacgctgaggaggcgggggccggcgaggacggagcggac 1274
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgggaccaggccgcgcacgctggcgctgaggaggcgggggccggcgaggacggagcggac 240
Query: 1275 gcggcgctgaaggacggagaacggactctagggaacgaggcgaatcccgaaccgccgtca 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcggcgctgaaggacggagaacggactctagggaacgaggcgaatcccgaaccgccgtca 300
Query: 1335 gaaaaacaggatgaagacaaacgagcgccggcggatgggaaacaggaagcggatgtggac 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaaaacaggatgaagacaaacgagcgccggcggatgggaaacaggaagcggatgtggac 360
Query: 1395 agccaggagaaggatatcaacaacgacccgccgctgcaaccggatgtagagaagcccggg 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agccaggagaaggatatcaacaacgacccgccgctgcaaccggatgtagagaagcccggg 420
Query: 1455 gagaagagacgtaaaaagcaaatggtcggcatcttccccctggcgaccatgggcgggccc 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagaagagacgtaaaaagcaaatggtcggcatcttccccctggcgaccatgggcgggccc 480
Query: 1515 ctagtggcgcccgtgtccagtctgctgagagccgtccctccgccgccgctgcccaggata 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctagtggcgcccgtgtccagtctgctgagagccgtccctccgccgccgctgcccaggata 540
Query: 1575 ttccgcacacgtccggggaccgcgcccctcgccgtggatcacctcaaccctgacgtcccg 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttccgcacacgtccggggaccgcgcccctcgccgtggatcacctcaaccctgacgtcccg 600
Query: 1635 gagttcgtcccccaggccaggagaaacgaggaaccgatggattccgcggagaaacaggac 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gagttcgtcccccaggccaggagaaacgaggaaccgatggattccgcggagaaacaggac 660
Query: 1695 aatggttccagtgcatcatcagacagaggagatgctgatgtatggacggaggtgaagcgc 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aatggttccagtgcatcatcagacagaggagatgctgatgtatggacggaggtgaagcgc 720
Query: 1755 cgtaccaaggc-ggggtctcgggagcgtgcgccccgacctgac 1796
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 721 cgtaccaaggcgggggtctcgggagcgtgcgccccgacctgac 763
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,573
Number of extensions: 5066
Number of successful extensions: 5066
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5063
Number of HSP's successfully gapped: 1
Length of query: 3586
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3568
Effective length of database: 8,109,745
Effective search space: 28935570160
Effective search space used: 28935570160
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)