BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02693 (UTR included)
(2470 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027A2E12 1080 0.0
>BF01027A2E12
Length = 681
Score = 1080 bits (545), Expect = 0.0
Identities = 607/624 (97%), Gaps = 4/624 (0%)
Strand = Plus / Plus
Query: 1850 actaccgacgtcgtcgacgtgtttcaatctacttaaactaccgaactaccaaaagagaag 1909
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 actaccgacgtcgtcgacgtgtttcaatctccttaaactaccgaactaccaaaagagaag 60
Query: 1910 tacactgcgagataaactgcggtacgcggttaattgtaacacaggtttcgaactgtccta 1969
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct: 61 tacactgcgagataaactacggtacgcggttaattgtaacacaggtttcgaactatctta 120
Query: 1970 agacattaaaa-gatgcaaatgcacgaatttatgtaaaataaaaacatgaagtatagtcg 2028
| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatattaaaaagatgcaaatgcacgaatttatgtaaaataaaaacatgaagtatagtcg 180
Query: 2029 ccacaaatgtaacatagatggcgctgaatgtctaacaattttaagttttcaacgaagatc 2088
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 181 ccacaaatgtaacatagatggcgctgaatgtgtaacaattttaagttttcaaccaagatc 240
Query: 2089 ttcattttatgccaaaacatatttttaaaagctccaaatgttctcagggacttgagacaa 2148
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 ttcattttatgccaaaacatatttttaaaagctccaaatgttctcggggacttgagacaa 300
Query: 2149 acacatcacggttagtcttgtgtatatattttaaaaggaacttgtaattgtactgtttta 2208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acacatcacggttagtcttgtgtatatattttaaaaggaacttgtaattgtactgtttta 360
Query: 2209 aaattttacttgtatttttagtttttctgttcacgatgtgtttgtaagtcataatacatg 2268
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 361 aaattttacttgtatttttagtttttctgttcactatgtgtttataagtcataatacatg 420
Query: 2269 catctgtttttctacacaatatttttatatatacttg--aaaaaaatataacattgatta 2326
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 421 catctgtttttctacacaatatttttatatatacttgaaaaaaaaatataacattgatta 480
Query: 2327 agatgaataatataaagtaaaagtaagatcagaatttatgtatgtatataaattgaatag 2386
| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 481 atatgaataatataaagt-aaagtaagatcagaacttatgtatgtatataaattgaatag 539
Query: 2387 ttaaatttggactgtcatttaccatattcaatgaaagtgaatccgtgaactcgatgttag 2446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttaaatttggactgtcatttaccatattcaatgaaagtgaatccgtgaactcgatgttag 599
Query: 2447 tcttaataatatatattttttaat 2470
||||||||||||||||||||||||
Sbjct: 600 tcttaataatatatattttttaat 623
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,925
Number of extensions: 8359
Number of successful extensions: 8359
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8356
Number of HSP's successfully gapped: 1
Length of query: 2470
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2453
Effective length of database: 8,119,229
Effective search space: 19916468737
Effective search space used: 19916468737
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)