BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02712 (UTR included)
(2209 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A2D03 1441 0.0
>BF01031A2D03
Length = 821
Score = 1441 bits (727), Expect = 0.0
Identities = 760/771 (98%)
Strand = Plus / Plus
Query: 1105 tagacgtcaataacacaagggaagctatattgtccattcaggaagcggtcgatgtggcat 1164
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 51 tagacgtcaataacacaagggaagctatattgtccattcaggaagcggtggatgtggcat 110
Query: 1165 tgattagggaagccaaggtagcagctaggaatgaatgcaaagtcaaagaacttgaggccg 1224
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 111 tgattagggaagccaaggtagcagctaggaatgaatgcaaagtcaaagaacttgaggcgg 170
Query: 1225 aaattaagcaaatgagtgccatattagctgagaaacatgaagccgatttgagttcggcct 1284
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 171 aaattaagcagatgagtgccatactagctgagaaacatgaagccgatttgagttcggcct 230
Query: 1285 ataacaaagtactggaaaagaaatatatcaatagggatgttgaaatggcgcaggcctgta 1344
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 231 ataacaaagtactggaaaagaaatatatcaatagagatgttgaaatggcgcaggcctgta 290
Query: 1345 ttgacgcgattagaacacctgccagtgtggacatcctcagcattccaaatgttatgatta 1404
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 291 ttgacgcgattagaacacctgccagtgtggatatcctcagcattccaaatgttatgatta 350
Query: 1405 tatccaacataaccgaatcaaccgtcgaaaccccgattcagcacaccactgatgttaacg 1464
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 351 tatccaacataaccgaatcaaccgtcgaaaccccgattctgcacaccactgatgttaacg 410
Query: 1465 ggagaggccaaagtccgagtgtagattgctcaaatctcgtactaccttccacatcgggac 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ggagaggccaaagtccgagtgtagattgctcaaatctcgtactaccttccacatcgggac 470
Query: 1525 aatcaccttcattgaactacgccgcagcagtcaagaaaccctcagacggaggatcctgca 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aatcaccttcattgaactacgccgcagcagtcaagaaaccctcagacggaggatcctgca 530
Query: 1585 gcaaaacgaaaaatctcaatgaagatctcatcacctttgatgtagaggacaagagcctga 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gcaaaacgaaaaatctcaatgaagatctcatcacctttgatgtagaggacaagagcctga 590
Query: 1645 ggacacaaaaacaggtcattgtcaatgacaacatcagtttaggcggaagctcgcccgagt 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 591 ggacacaaaaacaggtcattgtcaatgacaacatcagtttaggcggaagctcgccagaat 650
Query: 1705 attgaatgtgccttatccaaatgttaattttaagttaccattaacatcctaacattattt 1764
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 651 attgaatgtgccttatccaaatgttaattttaagttaccattaacaccctaacattattt 710
Query: 1765 ttttgtttctgttggattctttaacattttgttagttgtttgtattcagttacactaatt 1824
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ttttgtttctgttggattcttcaacattttgttagttgtttgtattcagttacactaatt 770
Query: 1825 ttaagttaatctcaaagttaaaggcatgtaaatattatcactagatctacc 1875
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ttaagttaatctcaaagttaaaggcatgtaaatattatcactagatctacc 821
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,007
Number of extensions: 6807
Number of successful extensions: 6807
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6805
Number of HSP's successfully gapped: 1
Length of query: 2209
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2192
Effective length of database: 8,119,229
Effective search space: 17797349968
Effective search space used: 17797349968
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)