BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02718 (UTR included)
(1567 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018B2D12 839 0.0
>BF01018B2D12
Length = 660
Score = 839 bits (423), Expect = 0.0
Identities = 441/447 (98%)
Strand = Plus / Plus
Query: 351 tgatatatttaccatgtttacctttaaatagactttagttaaattcattattacacaaaa 410
||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 1 tgatatatttaccatgtttacctttttatagactttagttaaattcaatattacacaaaa 60
Query: 411 tgttgcaaatccaacgccaggtatgtcaacaatagagctaagaaaattgaaaatataaat 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttgcaaatccaacgccaggtatgtcaacaatagagctaagaaaattgaaaatataaat 120
Query: 471 tttttcattctttatgaatttccatttcagatgtttacctatttatcgcaaaatatacat 530
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 tttttcatcctttatgaatttccatttcagatgtttacccatttatcgcaaaatatacat 180
Query: 531 aaacagagatcattccccgtaaggtatttttgggagtatgttaatatgatgtttaataaa 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaacagagatcattccccgtaaggtatttttgggagtatgttaatatgatgtttaataaa 240
Query: 591 ccagatcaagagcgtataaaaacattaggtccagatcgagcttgtgctgaatgggtttta 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccagatcaagagcgtataaaaacattaggtccagatcgagcttgtgctgaatgggtttta 300
Query: 651 cgtaacggaggtaaagtgacttggtcaaatggaaagcaactggccgattataatttattg 710
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 cgtaacggaggtaaagtgacttggtcaaatggaaaggaactggccgattataatttattg 360
Query: 711 ccaccagaaagtcaatccgttcctaaagtggtcacgattgatggttcggagtcatctata 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaccagaaagtcaatccgttcctaaagtggtcacgattgatggttcggagtcatctata 420
Query: 771 tcacactatggatttgctcatttaagt 797
|||||||||||||||||||||||||||
Sbjct: 421 tcacactatggatttgctcatttaagt 447
Score = 278 bits (140), Expect = 3e-74
Identities = 146/148 (98%)
Strand = Plus / Plus
Query: 791 tttaagtggttgtacaatgttacaaagaataatcctccatgacaacaaatatattgatga 850
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tttaggtggttgtacaatgttacaaagaataatcctccatgacaacaaatatattgatga 572
Query: 851 cagagcaatgaaaggattagaatatggaaaggatacattggagtttgtccaggtgtccaa 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cagagcaatgaaaggattagaatatggaaaggatacattggagtttgtccaggtgtccaa 632
Query: 911 atgttataatgtcactgatgtgggtgtc 938
||||||||||||||| ||||||||||||
Sbjct: 633 atgttataatgtcaccgatgtgggtgtc 660
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,306
Number of extensions: 5843
Number of successful extensions: 5843
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5843
Number of HSP's successfully gapped: 2
Length of query: 1567
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1550
Effective length of database: 8,119,229
Effective search space: 12584804950
Effective search space used: 12584804950
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)