BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02723 (UTR included)
(2365 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009B2D11 942 0.0
>BF01009B2D11
Length = 797
Score = 942 bits (475), Expect = 0.0
Identities = 481/483 (99%)
Strand = Plus / Plus
Query: 1376 ggacgttttgtatatcggcgaccacatcttcggtgacatactcaagtccaagaagatagg 1435
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacgttctgtatatcggcgaccacatcttcggtgacatactcaagtccaagaagatagg 60
Query: 1436 aggctggcggacattcctcatagtgcccgagctggtgcaggagttgcacgtctggaccga 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggctggcggacattcctcatagtgcccgagctggtgcaggagttgcacgtctggaccga 120
Query: 1496 caagtgcaccttgttcgcacagctgcaaaacctggacgtccagctgggcgatatgtacaa 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagtgcaccttgttcgcacagctgcaaaacctggacgtccagctgggcgatatgtacaa 180
Query: 1556 agacttagactcgagcaccaaagagaagccggatatatcaaagctccgcatatcaatacg 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agacttagactcgagcaccaaagagaagccggatatatcaaagctccgcatatcaatacg 240
Query: 1616 ggatgtgacgcacaagatggatctcgcgtacgggatgctgggctcgctgttccgctcggg 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggatgtgacgcacaagatggatctcgcgtacgggatgctgggctcgctgttccgctcggg 300
Query: 1676 atctagacagactttcttctcgtctcaggtggtgaggtacgcggacctgtacgcggcgtc 1735
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atctagacagactttcttctcttctcaggtggtgaggtacgcggacctgtacgcggcgtc 360
Query: 1736 gttcctcaacctcatgtactacccgttctgctacatgttccgagcgccggctatgctcat 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttcctcaacctcatgtactacccgttctgctacatgttccgagcgccggctatgctcat 420
Query: 1796 gccccacgagtccacggtcgcccacgagcagaggttcacagtcgacactcccaccatcga 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccccacgagtccacggtcgcccacgagcagaggttcacagtcgacactcccaccatcga 480
Query: 1856 cag 1858
|||
Sbjct: 481 cag 483
Score = 89.7 bits (45), Expect = 2e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 2321 ctcaagttcccagcgagcttttagcgcggcctgcatcagtgaact 2365
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctcaagttcccagcgagcttttagcgcggcctgcatcagtgaact 537
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,978
Number of extensions: 5754
Number of successful extensions: 5754
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5754
Number of HSP's successfully gapped: 2
Length of query: 2365
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2348
Effective length of database: 8,119,229
Effective search space: 19063949692
Effective search space used: 19063949692
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)