BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02725 (UTR included)
(1831 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A1H03 1231 0.0
BF01054B1G01 839 0.0
>BF01054A1H03
Length = 731
Score = 1231 bits (621), Expect = 0.0
Identities = 700/731 (95%)
Strand = Plus / Plus
Query: 394 aaatggattcactagactctctccaggactttataaagtcacaaaataattttacgaatt 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatggattcactagactctctccaggactttataaagtcacaaaataattttacgaatt 60
Query: 454 atattaataaatctaatgtgccagatgtttgtaaatcagaaccttgtatgcttggtgttg 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atattaataaatctaatgtgccagatgtttgtaaatcagaaccttgtatgcttggtgttg 120
Query: 514 acgaagctggacgtgggcctgttttgggtccaatggtatacggaattgcatattgtccaa 573
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 121 acgaagctggacgtgggcctgttttgggtccaatggtatatggaattgcatattgtccga 180
Query: 574 taaatcaaaacaaagtattagaatcgctcggctgtgcggactcaaaagctcttacagaag 633
|||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 181 taaatcaaaagaaagtattagaatcgctcggcnnntttnnnncaaaagctcttacagaag 240
Query: 634 aaaagagagacgagatttttcttaaaatgttaaccgagaaagaagctgttgataatgttg 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaagagagacgagatttttcttaaaatgttaaccgagaaagaagctgttgataatgttg 300
Query: 694 gctggatggctgaagttatatcaccaaattatatttctaactctatgtataaaagagcca 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctggatggctgaagttatatcaccaaattatatttctaactctatgtataaaagagcca 360
Query: 754 aacattctctcaacgaggtatcaatgaattccgcgatatctttgataaaaaaaactattg 813
|||| ||||||||||||||||| ||||||||||||||||| |||||||||||| | |||
Sbjct: 361 aacactctctcaacgaggtatcgatgaattccgcgatatcattgataaaaaaatcgtttg 420
Query: 814 aattaggtgggaatataacagaggtgtatgtggatactgtcggccctccggagaaatatc 873
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 421 aattaggtgggaatataacagaggtgtatgtggatacagtcggccctcccgagaaatatc 480
Query: 874 aggccaggttaaaagaaatcttccctgatattaagatcaccgtggcaaagaaagctgatt 933
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 481 aggccaggttaaaagaaatcttccctgatattaagattaccgtcgcaaagaaagctgatt 540
Query: 934 ccatttacccaatagtgtcggcggccagtatagtggctaaggtcacaagagaccacgccc 993
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 541 ccatttacccaatagtgtcggcggccagtatagtggctaaggtcacgagagaccacgccc 600
Query: 994 tcaaggtttgggaatttcccgaaggtcttgagatcaatcacaaggactttgggagtggtt 1053
||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 601 tcaaggtttgggaatttcccgnnnntcttgagatcaatcacannnactttgggagtggtt 660
Query: 1054 acccaggagatccattgactaagaagtttataagggaacagattgacagaatattcggct 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acccaggagatccattgactaagaagtttataagggaacagattgacagaatattcggct 720
Query: 1114 accccctgttg 1124
|||||||||||
Sbjct: 721 accccctgttg 731
>BF01054B1G01
Length = 770
Score = 839 bits (423), Expect = 0.0
Identities = 462/475 (97%)
Strand = Plus / Plus
Query: 540 ggtccaatggtatacggaattgcatattgtccaataaatcaaaacaaagtattagaatcg 599
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 296 ggtccaatggtatacggaattgcatattgtccgataaatcaaaagaaagtattagaatcg 355
Query: 600 ctcggctgtgcggactcaaaagctcttacagaagaaaagagagacgagatttttcttaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctcggctgtgcggactcaaaagctcttacagaagaaaagagagacgagatttttcttaaa 415
Query: 660 atgttaaccgagaaagaagctgttgataatgttggctggatggctgaagttatatcacca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 atgttaaccgagaaagaagctgttgataatgttggctggatggctgaagttatatcacca 475
Query: 720 aattatatttctaactctatgtataaaagagccaaacattctctcaacgaggtatcaatg 779
||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 476 aattacatttcaaactctatgtataaaagagccaaacactctctcaacgaggtatcgatg 535
Query: 780 aattccgcgatatctttgataaaaaaaactattgaattaggtgggaatataacagaggtg 839
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 536 aattccgcgatatcattgataaaaaaatctattgaattaggtgggaatataacagaggtg 595
Query: 840 tatgtggatactgtcggccctccggagaaatatcaggccaggttaaaagaaatcttccct 899
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 596 tatgtggataccgtcggccctcccgagaaatatcaggccaggttaaaagaaatcttccct 655
Query: 900 gatattaagatcaccgtggcaaagaaagctgattccatttacccaatagtgtcggcggcc 959
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 656 gatattaagatcaccgttgcaaagaaagctgattccatctacccaatagtgtcggcggcc 715
Query: 960 agtatagtggctaaggtcacaagagaccacgccctcaaggtttgggaatttcccg 1014
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 716 agtatagtggctaaggtcacgagagaccacgccctcaaggtttgggaatttcccg 770
Score = 511 bits (258), Expect = e-144
Identities = 261/262 (99%)
Strand = Plus / Plus
Query: 281 tgtgtcttgaatgttagaattttgggcgggattattataatacattagctaaaatatatt 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tgtgtcttgaatgttagaattttgggcgggattattataatacattagctaaaatatatt 72
Query: 341 acgttaaaaatgaaattctaaggttttactccaatacaaatcattttatttttaaatgga 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 acgttaaaaatgaaattctaaggttttactccaatacaaatcattttatttttaaatgga 132
Query: 401 ttcactagactctctccaggactttataaagtcacaaaataattttacgaattatattaa 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttcactagactctctccaggactttataaagtcacaaaataattttacgaattatattaa 192
Query: 461 taaatctaatgtgccagatgtttgtaaatcagaaccttgtatgcttggtgttgacgaagc 520
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 193 taaatctaatgtgccagatgtttgtaaatcagaaccttgtatgcttggtgttgatgaagc 252
Query: 521 tggacgtgggcctgttttgggt 542
||||||||||||||||||||||
Sbjct: 253 tggacgtgggcctgttttgggt 274
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 258,366
Number of extensions: 5696
Number of successful extensions: 5696
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5696
Number of HSP's successfully gapped: 4
Length of query: 1831
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1814
Effective length of database: 8,119,229
Effective search space: 14728281406
Effective search space used: 14728281406
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)