BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02729 (UTR included)
(1828 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1622_C1 1905 0.0
>BF14_1622_C1
Length = 1090
Score = 1905 bits (961), Expect = 0.0
Identities = 968/969 (99%), Gaps = 1/969 (0%)
Strand = Plus / Plus
Query: 357 cgtactacttttaactttagcgttttccctccttaaca-tttttggcgtacatttaatgt 415
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 cgtactacttttaactttagcgttttccctccttaacantttttggcgtacatttaatgt 60
Query: 416 aatttactacagtttattgtgattaaattccaacaagttattctttttacgcttatttag 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatttactacagtttattgtgattaaattccaacaagttattctttttacgcttatttag 120
Query: 476 aactaattacttttcggcattaaaaatgcggaaaatatccaaaaatcgtacagatgacga 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aactaattacttttcggcattaaaaatgcggaaaatatccaaaaatcgtacagatgacga 180
Query: 536 tgttgtttcatcgaccaatggatctgcatctgtcgggaacgaggagagtcaagaatcaga 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgttgtttcatcgaccaatggatctgcatctgtcgggaacgaggagagtcaagaatcaga 240
Query: 596 gcaaggcaaaaaacaagccaataatgaagacaatgaaaattataaagacaaaaacaaaag 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaaggcaaaaaacaagccaataatgaagacaatgaaaattataaagacaaaaacaaaag 300
Query: 656 tgaagatgataaggattcatcttctgttaagggaacgcctaagaagagtaaatcaaaaca 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaagatgataaggattcatcttctgttaagggaacgcctaagaagagtaaatcaaaaca 360
Query: 716 gtcgaaaaaaaagaaatccgaaaaagtaaataaaaaagacgctgaagaagaatatgaggt 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcgaaaaaaaagaaatccgaaaaagtaaataaaaaagacgctgaagaagaatatgaggt 420
Query: 776 ggaaaaaattttggattccaaaaaaataaaagggaaattgcactatctaatacgttggaa 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggaaaaaattttggattccaaaaaaataaaagggaaattgcactatctaatacgttggaa 480
Query: 836 gggctattcagccgatagtgatagttgggaaccgtctaatacgttgtcttgcccagattt 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggctattcagccgatagtgatagttgggaaccgtctaatacgttgtcttgcccagattt 540
Query: 896 aatcatcaaatataatgaggagaaggaaaattcaaagaacagtccatcaaaaaaagctaa 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatcatcaaatataatgaggagaaggaaaattcaaagaacagtccatcaaaaaaagctaa 600
Query: 956 caaacggaaaggtgctaagaaagagagtaaatcgccaccaaagaaatctaaaaccagttg 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caaacggaaaggtgctaagaaagagagtaaatcgccaccaaagaaatctaaaaccagttg 660
Query: 1016 ggactccgagaatgctgatgaagatgctgagtatgaggtagagcgcattcttgaagttca 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggactccgagaatgctgatgaagatgctgagtatgaggtagagcgcattcttgaagttca 720
Query: 1076 tcacaagaagaatggcagcagggattttttgattcattggaagggatggtcaagcaaatt 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcacaagaagaatggcagcagggattttttgattcattggaagggatggtcaagcaaatt 780
Query: 1136 tgactcctgggaacccgaggcaaatttaaattgccccgatttaataaaaagatttatgga 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgactcctgggaacccgaggcaaatttaaattgccccgatttaataaaaagatttatgga 840
Query: 1196 gaaggttgaaaatgctaaaacaactgagagtaggaatttaagagtagctccagagaccac 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaaggttgaaaatgctaaaacaactgagagtaggaatttaagagtagctccagagaccac 900
Query: 1256 aaaccgtttcactctccaagatccaacatcagggcgacgtctcagtaagagaagaggaca 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aaaccgtttcactctccaagatccaacatcagggcgacgtctcagtaagagaagaggaca 960
Query: 1316 acgccaacg 1324
|||||||||
Sbjct: 961 acgccaacg 969
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 325,654
Number of extensions: 7986
Number of successful extensions: 7986
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7983
Number of HSP's successfully gapped: 1
Length of query: 1828
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1811
Effective length of database: 8,119,229
Effective search space: 14703923719
Effective search space used: 14703923719
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)