BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02735 (UTR included)
(1708 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2659_C1 1639 0.0
>BF14_2659_C1
Length = 843
Score = 1639 bits (827), Expect = 0.0
Identities = 839/843 (99%)
Strand = Plus / Plus
Query: 404 tgaagagtagagcctggtatgttaatttacgtcgaaagaatttatgaataatatcaagtt 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagagtagagcctggtatgttaatttacgtcgaaagaatttatgaataatatcaagtt 60
Query: 464 ttaacaaattgtgcaaataaattagttatttgaaacaatgggtgacggacaaagtgaaaa 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaacaaattgtgcaaataaattagttatttgaaacaatgggtgacggacaaagtgaaaa 120
Query: 524 tcaaccattgttgagggatgaggatgaaaatgtcagtactatttcgccgatcggccctga 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaaccattgttgagggatgaggatgaaaatgtcagtactatttcgccgatcggccctga 180
Query: 584 tgagttgcctccaccttaccagcaggctgggatgcctatggttacatgtcgcgtttgtca 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgagttgcctccaccttaccagcaggctgggatgcctatggttacatgtcgcgtttgtca 240
Query: 644 ggctatgattgatatatctggcaagagagaacaacacgtcgtcaaatgctcagagtgtaa 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggctatgattgatatatctggcaagagagaacaacacgtcgtcaaatgctcagagtgtaa 300
Query: 704 tgaagctacgccaatcagaaacgctccgccgggcaaaaagtacgtgcgttgtccgtgcaa 763
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 tgaagctacgccaatcagaaacgctccgccgggcaagaagtacgtgcgttgtccgtgcaa 360
Query: 764 ctgcctgctgatatgcaagtcctcgtcgcaacggatcgcgtgccctcgggctgactgcaa 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgcctgctgatatgcaagtcctcgtcgcaacggatcgcgtgccctcgggctgactgcaa 420
Query: 824 gcgcatcatcaacctagcgccgtccccagtgaccccgcccgtgcccactctccccggcat 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgcatcatcaacctagcgccgtccccagtgaccccgcccgtgcccactctccccggcat 480
Query: 884 gtgcagggtcatgtgcgcacattgccaggacaccttcttgtaccagatgttaaagaacgc 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgcagggtcatgtgcgcacattgccaggacaccttcttgtaccagatgttaaagaacgc 540
Query: 944 gccggtccgctgtccccattgtcgtaaagtatcgtcagttggtccccgcatggcgcgcgt 1003
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 541 gccggtccgctgtccccattgccgtaaagtatcgtcagtgggtccccgcatggcgcgcgt 600
Query: 1004 ccgcggcaccatattcgccctgctcgctctcttgttcttcgcgatcgctctaggcgtgac 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccgcggcaccatattcgccctgctcgctctcttgttcttcgcgatcgctctaggcgtgac 660
Query: 1064 cctggggaccctgtccgccgctaagacccacggcggcggcgtctacgtggcctatgtggg 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cctggggaccctgtccgccgctaagacccacggcggcggcgtctacgtggcctatgtggg 720
Query: 1124 cgccttcttagtagcgctgctgctcgccagccgcgccgtctactacttcgccatgaagca 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgccttcttagtagcgctgctgctcgccagccgcgccgtctactacttcgccatgaagca 780
Query: 1184 cagcactatcgagggtcccatgtaaataatgtgatattttaacgccttgacatatttcta 1243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cagcaccatcgagggtcccatgtaaataatgtgatattttaacgccttgacatatttcta 840
Query: 1244 gtt 1246
|||
Sbjct: 841 gtt 843
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 231,873
Number of extensions: 5623
Number of successful extensions: 5623
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5623
Number of HSP's successfully gapped: 1
Length of query: 1708
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1691
Effective length of database: 8,119,229
Effective search space: 13729616239
Effective search space used: 13729616239
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)