BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02740 (UTR included)
(4225 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B2F09 906 0.0
>BF01043B2F09
Length = 517
Score = 906 bits (457), Expect = 0.0
Identities = 466/469 (99%)
Strand = Plus / Minus
Query: 2662 ttcaggaagtcatatcgaacacagatgacgagcgagcagacgtcgcctggttagcagtct 2721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ttcaggaagtcatatcgaacacagatgacgagcgagcagacgtcgcctggttagcagtct 458
Query: 2722 taacacggatccgaacgcagagagatcagatggtcatgcaatataaagatgccgtccccc 2781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 taacacggatccgaacgcagagagatcagatggtcatgcaatataaagatgccgtccccc 398
Query: 2782 gaccacgggtgctgtggcggattaatgcgatgctcgaccagcatagcgaggtcctcaagg 2841
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 397 gaccacgggtgctgtggcggattaatgcgatgctagaccagcatagcgaggtcctcaagg 338
Query: 2842 agttcttcaacatcagcaatccgtccagtcgcgatataaacgagctgtttgaatatttgc 2901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agttcttcaacatcagcaatccgtccagtcgcgatataaacgagctgtttgaatatttgc 278
Query: 2902 gatcccgaatcgaaactgaccccgaggctagagaccatatacgggatcaccttccagctc 2961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gatcccgaatcgaaactgaccccgaggctagagaccatatacgggatcaccttccagctc 218
Query: 2962 tgattcagttgcgaccgcgatcggcggcggcgcttctcaatgaacagcaaactaatacga 3021
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 217 tgattcagttgcgaccgcgatcggtggcggcgcttctcaatgaacagcaaactaatacga 158
Query: 3022 taggatctgtttacgacacattaagtaccgaatgtagaatagaattcggcgagtgtctcc 3081
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 taggatctgtttacgacactttaagtaccgaatgtagaatagaattcggcgagtgtctcc 98
Query: 3082 tagacatggggcgcttgaagggggacatcgccgcatctcacctccgaac 3130
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tagacatggggcgcttgaagggggacatcgccgcatctcacctccgaac 49
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 455,586
Number of extensions: 22176
Number of successful extensions: 22176
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22176
Number of HSP's successfully gapped: 1
Length of query: 4225
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4207
Effective length of database: 8,109,745
Effective search space: 34117697215
Effective search space used: 34117697215
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)