BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02748 (UTR included)
(2275 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2E08 1382 0.0
>BF01054B2E08
Length = 788
Score = 1382 bits (697), Expect = 0.0
Identities = 765/788 (97%), Gaps = 11/788 (1%)
Strand = Plus / Plus
Query: 444 gtcgaattataagtggtgattatttagtggaatatttaaatctgtgctataaaaaaaatg 503
||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 12 gtcgatttataagtggtgattatttagtggaatatttcaatctgtgctataaaa-aaatg 70
Query: 504 ccttttcgtcgaagcaagggtctagtgaaatggatcttcgagaaccagcacaagatgcag 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ccttttcgtcgaagcaagggtctagtgaaatggatcttcgagaaccagcacaagatgcag 130
Query: 564 tccgtccgccgctgcagctcgttggctcgctacaaggagatggaggacagcgccgcctcc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tccgtccgccgctgcagctcgttggctcgctacaaggagatggaggacagcgccgcctcc 190
Query: 624 gaacatgacgtcagcggacccaagacccgtccggagatcacgccagaaatatccttcaag 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gaacatgacgtcagcggacccaagacccgtccggagatcacgccagaaatatccttcaag 250
Query: 684 cacgacgatcttcaagtgaggctcgcggcgccgtaccagttgcagacgaagccggacgcg 743
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 251 cacgacgatcttcaagtgaggctcgcggcgccgtaccagttgcaaacgaagccggaggcg 310
Query: 744 gtcgagttaggcttcgggaagtacttcacggatcacatgctcaagatccactacagcaag 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gtcgagttaggcttcgggaagtacttcacggatcacatgctcaagatccactacagcaag 370
Query: 804 cacctcgggggctggcagaagccggagatcacgcccttcgagaacctcagcctccatccc 863
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 371 cacctcggaggctggcagaagccggagatcacgcccttcgagaacctcagcctccacccc 430
Query: 864 gccgccaaggctctacattatgcaatacaattattcgaaggtatgaaggcgtataggggt 923
|||||||||||||||||||| || |||||| ||||||||||||| |||||
Sbjct: 431 gccgccaaggctctacattacgctatacaa----------gtatgaaggcgtacaggggc 480
Query: 924 gtagacgacaagatacgattgtttcgaccggaactcaatatggagaggatgaacctggcg 983
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 481 gtcgacgacaagatacgattgtttcgaccggaactcaacatggagaggatgaacctggcg 540
Query: 984 gctcagaggtccggcttgcccatgttcgacggccaggaactgatccgctgcatcacgagg 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctcagaggtccggcttgcccatgttcgacggccaggaactgatccgctgcatcacgagg 600
Query: 1044 ctcatacagatagaccaggagtgggtccctcactcggagacctccacgctgtacgtccgc 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctcatacagatagaccaggagtgggtccctcactcggagacctccacgctgtacgtccgc 660
Query: 1104 cccacgctcataggcacggagcccacgttcggcatcatggagccggagagcgcgctgctg 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cccacgctcataggcacggagcccacgttcggcatcatggagccggagagcgcgctgctg 720
Query: 1164 ttcgtgatcttgagtcccgtgtccgcctactatcagacccgcggggacggcgccgtgtcc 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttcgtgatcttgagtcccgtgtccgcctactatcagacccgcggggacggcgccgtgtcc 780
Query: 1224 atcttcgc 1231
||||||||
Sbjct: 781 atcttcgc 788
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 205,672
Number of extensions: 4885
Number of successful extensions: 4885
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4882
Number of HSP's successfully gapped: 2
Length of query: 2275
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2258
Effective length of database: 8,119,229
Effective search space: 18333219082
Effective search space used: 18333219082
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)