BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02760 (UTR included)
(3406 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B2G12 1459 0.0
BF01016B1B04 1193 0.0
BF01047A1D05 654 0.0
>BF01010B2G12
Length = 797
Score = 1459 bits (736), Expect = 0.0
Identities = 772/783 (98%), Gaps = 2/783 (0%)
Strand = Plus / Plus
Query: 405 gaacaaagcgaaaagtttataaaaggcatttaatcgcgtagtctaaactcagtgttatta 464
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 17 gaacaaagcgaaaagtttataaaaggcatttaatcgcgtaatctaaactcagtgttatta 76
Query: 465 aagttatgttatagcgtgggtttgtggagaccgaccatgttggtgttatttgtgatatat 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 aagttatgttatagcgtgggtttgtggagaccgaccatgttggtgttatttgtgatatat 136
Query: 525 ttgttggggacatgtcgtgcgtctgtggcgacgagctgtgaccgcgctccgcccgactct 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ttgttggggacatgtcgtgcgtctgtggcgacgagctgtgaccgcgctccgcccgactct 196
Query: 585 caacctgctgataaaaattacaagctgagtgtagctggagacccggacctcttcctgccg 644
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 197 caacctgctgataaaaattacaagctgagtgtagctggagacccggacctcttcttgccg 256
Query: 645 ggagagctgtacactgtatccctgcaaggtgtagatagcggacaaggcccgacgcctttc 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggagagctgtacactgtatccctgcaaggtgtagatagcggacaaggcccgacgcctttc 316
Query: 705 gtagggttcttgatatgggctgagttggatgatccgggtaatgagagtaatgacgacact 764
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 317 gtagggttcttgatatgggctgagttggatgatgcgggtaatgagagtaatgacgaaact 376
Query: 765 cccaggggtcctccggcgctcggggccctgcaggcctacgacactcagactaaactctac 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cccaggggtcctccggcgctcggggccctgcaggcctacgacactcagactaaactctac 436
Query: 825 gagccctgtaagcctgctgtggataacgctacctctcatccaaagactgaagtacaagta 884
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gagccctgtaagcccgctgtggataacgctacctctcatccaaagactgaagtacaagta 496
Query: 885 atatggagttccccatcgaccgtgactgagtacaattgcgtcagactatgcgctcgtgca 944
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 497 atatggagttccccatcgaccgtgactgagtacaattgcgttagactatgcgctcgtgca 556
Query: 945 gcaaacgcggagggcacgacgagctccatcctgtgccgcaagttatgttcagctccggtc 1004
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 557 gcaaacgcggagggcacgacgagctctatcctgtgccgcaagttatgttcagcaccggtc 616
Query: 1005 ggaaccacgaccagcaatcaacagccgccgatcctggaaccatgctgtgcatgcgacgag 1064
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 617 ggaaccacgaccagcaatcaacagccgccgatcctggaaccatgctgtgcat--gacgag 674
Query: 1065 gctaaatatgaggtcacgtttgaaggactctggtccaggaacacacaccctcaggagttc 1124
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 675 gctaaatatgaggtcacgtttgaaggactctggtccaggaacacacacccccaggagttc 734
Query: 1125 cctcctgaaggatcgcgagctcattttggggacgtcatcggtgcttctcatacagctcaa 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 cctcctgaaggatcgcgagctcattttggggacgtcatcggtgcttctcatacagctcaa 794
Query: 1185 tac 1187
|||
Sbjct: 795 tac 797
>BF01016B1B04
Length = 720
Score = 1193 bits (602), Expect = 0.0
Identities = 692/720 (96%), Gaps = 9/720 (1%)
Strand = Plus / Plus
Query: 2535 cggcagatctgcgagcagacttgtctgtcacaaggaaacaaacacgacaacgcgtcggcg 2594
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1 cggcagatctgcgagcagacttgtctgtcgcaaggaaacaaacacgacaatgcgtcggcg 60
Query: 2595 ctggtcggagtcgcgcccaagaggatcaaggcgactccctcgacagaggacaacgaggtc 2654
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggtcggagtcgcgccgaagaggatcaaggcgactccctcgacagaggacaacgaggtc 120
Query: 2655 atgcagaatgaccgagacgttcgcgatgtgagctgcgagatgggtccgtggctcggctgg 2714
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 atgcagaatgaccgagacgctcgcgatgtgagctgcgagatgggtccgtggctgggctgg 180
Query: 2715 agcgagtgcttcggccagtgcgacctcgccatcaagctcaactacagacgcgttctggtc 2774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcgagtgcttcggccagtgcgacctcgccatcaagctcaactacagacgcgttctggtc 240
Query: 2775 gcgtcgtcagggtcggggaagtcgtgccagaggactgtgaagagtcgagtctgtaagccg 2834
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgtcgtcagggtcaggaaagtcgtgccagaggactgtgaagagtcgagtctgtaagccg 300
Query: 2835 gagctgtgcaagaagaagaaacgcatgatcggcaataaaccgggtagttcgtttgaagat 2894
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 gagctgtgcaagaagaagaaacgcatgatcagcaataaaccgggtagttcgtttgaagat 360
Query: 2895 aacgattactaaatc--------aatcaatcaatcaatcgacagcaattactttcagcag 2946
||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 361 aacgattactaaatcaatcaatcaatcaatcaatcaatcgaaagcaattactttcagcag 420
Query: 2947 ttgactaatgcgtatacattgttaccggtagagtcgctagttgttcagataggtgcttct 3006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgactaatgcgtatacattgttaccggtagagtcgctagttgttcagataggtgcttct 480
Query: 3007 taggctgttctcatgtaagttgtgtttaggaaaattcgttagagtagactcttaagtctg 3066
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 481 taggctgttctcatgtaagttgtgtttagggaaattcgttagagtagagtcttaagtctg 540
Query: 3067 tttctaagagagggaggtaagtgtggaaataaaaggtggtgcatcacgctcagaggacgg 3126
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttctaagagagggatgtaagtgtggaaataaaaggtggtgcatcacgctcagaggacgg 600
Query: 3127 cgggaactatgcggtagctggagtcatggaaaaaacatttccaagaacacagagtgacac 3186
||| ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct: 601 cggaaactatgcggtagctggtgtcctggaaaaatcatttccaagaacacagagtgacga 660
Query: 3187 gctcgcca-cccaaaacgctgtactctccaatatctgacaataaaatctgtgaaaaggtc 3245
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 661 gctcgccaccccaaaacgctgtactttccaatatctgacaataaaatctgtgaaaaggtc 720
>BF01047A1D05
Length = 712
Score = 654 bits (330), Expect = 0.0
Identities = 354/364 (97%)
Strand = Plus / Plus
Query: 2062 aggaaagccccaagtcggactgtccggtgactccgtggtccacgtggtcgccgtgttcct 2121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aggaaagccccaagtcggactgtccggtgactccgtggtccacgtggtcgccgtgttcct 408
Query: 2122 cgcgctgcggccgaggccggcgactccgcaccaggatgtatgtggtgcgggagacgaacc 2181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cgcgctgcggccgaggccggcgactccgcaccaggatgtatgtggtgcgggagacgaacc 468
Query: 2182 ttcagcgagagatcactaagaggctgttaagggactggaaccaacggttcgctgaactcc 2241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 469 ttcagcgagagatcactaagaggctgttaagggactggaaccaacggttcgctgaactac 528
Query: 2242 agaatttggaactgcctcatgagaacataaccagcgaggacacgtccctggacgccgcgg 2301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 agaatttggaactgcctcatgagaacataaccagcgaggacacgtccctggacgccgcgg 588
Query: 2302 tccaggaacatctcgacagatgtcagttcacgatgacgcagcaggaggcgctgtgtgacg 2361
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 589 tccaggaacatctcgacagatgtcagttcacgatgacgcagcaggaggcgaagtgtgacg 648
Query: 2362 gaggcgacggaggctgctccgacaacccttcacccaatgagatctgcgcgctgccggtgt 2421
| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 649 gnnncgacggnnnctgctccgacaacccttcacccaatgagatctgcacgctgccggtgt 708
Query: 2422 cggt 2425
||||
Sbjct: 709 cggt 712
Score = 135 bits (68), Expect = 5e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1958 cagcacgacgcctgccgcactacactcacggaatacagatcctgtcatggaccgagactg 2017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 cagcacgacgcctgccgcactacactcacggaatacagatcctgtcatggaccgagactg 80
Query: 2018 cactgcag 2025
||||||||
Sbjct: 81 cactgcag 88
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,068
Number of extensions: 6258
Number of successful extensions: 6258
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6252
Number of HSP's successfully gapped: 4
Length of query: 3406
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3388
Effective length of database: 8,109,745
Effective search space: 27475816060
Effective search space used: 27475816060
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)