BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02862 (UTR included)
(2209 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B1H07 109 2e-23
BF01054A1H02 98 7e-20
BF14_729_C2 92 4e-18
BF01015A1H08 86 3e-16
BF01031A2D11 76 3e-13
BF01037B2C03 70 2e-11
>BF01038B1H07
Length = 768
Score = 109 bits (55), Expect = 2e-23
Identities = 128/151 (84%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 2051 taagacaaactttattaacattactaacaatttacaattgacctatccatttaacctcgc 2110
||||| ||||||||| |||||| || |||||| |||||| ||| |||||| | |||
Sbjct: 684 taagataaactttataaacattgcttacaattcacaattaaccctctcatttactcccgc 625
Query: 2111 tccgtctctttctattccacccc-ccaggagcgttgaatgtttaacgcaaccttgtcgga 2169
|||||||||||||||||| || | ||| ||||||||| ||||||||||||||||| | |
Sbjct: 624 tccgtctctttctattccccctctccattagcgttgaacgtttaacgcaaccttgttgaa 565
Query: 2170 agtcgcattagaagtttcacttcaataatta 2200
|||||||||||||||||||||||| |||||
Sbjct: 564 tgtcgcattagaagtttcacttcaaaaatta 534
>BF01054A1H02
Length = 850
Score = 97.6 bits (49), Expect = 7e-20
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 1992 gttggaatgaaaacaggaggagctagaaatagatttttaaggaatttttaatgttcctat 2051
|||| ||||||||||||| ||| ||||||| |||||||||||| |||| | |||| || |
Sbjct: 108 gttgtaatgaaaacaggaagaggtagaaattgatttttaaggatttttcagtgtttcttt 167
Query: 2052 aagacaaactttattaacattactaacaa 2080
|||||||||||||||||||||||| ||||
Sbjct: 168 aagacaaactttattaacattacttacaa 196
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 2139 agcgttgaatgtttaacgcaaccttgtcggaagtcgcattagaagtttcacttcaataa 2197
|||||| || ||||| ||||||| ||| ||||||||||| |||||||||||||||||||
Sbjct: 257 agcgttaaacgtttagcgcaaccatgttggaagtcgcataagaagtttcacttcaataa 315
>BF14_729_C2
Length = 1289
Score = 91.7 bits (46), Expect = 4e-18
Identities = 116/138 (84%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 2051 taagacaaactttattaacattactaacaatttacaattgacctatccatttaacctcgc 2110
||||||||||||||| |||||| || |||||| || |||||| ||||||| |||||
Sbjct: 1003 taagacaaactttataaacattgctcacaattcacctttgacccgcccatttactctcgc 944
Query: 2111 tccgtctctttctattccac-cccccaggagcgttgaatgtttaacgcaaccttgtcgga 2169
||||||||||||| |||| | |||||||||||| ||| |||| ||||| |||||| |||
Sbjct: 943 tccgtctctttcttttccgcttccccaggagcgtagaacgtttcacgcagccttgttgga 884
Query: 2170 agtcgcattagaagtttc 2187
| |||||||| |||||||
Sbjct: 883 attcgcattacaagtttc 866
>BF01015A1H08
Length = 688
Score = 85.7 bits (43), Expect = 3e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 1385 catattatatgttgtggacatatcggagcaatgtggacacagtctggaagaacag 1439
||||||||||||||||||||| || ||||||||||||| ||||||||||||||||
Sbjct: 12 catattatatgttgtggacatttcagagcaatgtggactcagtctggaagaacag 66
>BF01031A2D11
Length = 705
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1969 cggaagaagtaaaacttcgtaatgttggaatgaaaacaggaggagctagaaatagatttt 2028
|||||||||| ||||||||||| ||||||||||||||||| ||| ||||||| ||||||
Sbjct: 530 cggaagaagtgaaacttcgtaacgttggaatgaaaacaggcagagttagaaattgatttt 589
Query: 2029 ta 2030
||
Sbjct: 590 ta 591
>BF01037B2C03
Length = 796
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 2051 taagacaaactttattaacattactaacaatttacaattgacctatccatttaacctcgc 2110
||||||| ||||||| |||||| || | || |||||||||||| | ||||||| |||| |
Sbjct: 487 taagacagactttataaacattgcttaaaacttacaattgacccacccatttaccctcac 546
Query: 2111 tccgtctctttctat 2125
|||||||||||||||
Sbjct: 547 tccgtctctttctat 561
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 293,736
Number of extensions: 6247
Number of successful extensions: 6247
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 6245
Number of HSP's successfully gapped: 7
Length of query: 2209
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2192
Effective length of database: 8,119,229
Effective search space: 17797349968
Effective search space used: 17797349968
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)