BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02944 (UTR included)
(1891 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017B1A10 198 2e-50
>BF01017B1A10
Length = 716
Score = 198 bits (100), Expect = 2e-50
Identities = 268/321 (83%), Gaps = 8/321 (2%)
Strand = Plus / Plus
Query: 1055 gggaggtagatggcctgaggtcctcactcggagtgcggtgttggggcgtgcttcgtttga 1114
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gggaagtagatggcctgagatcctcactcggagtgcggtgttggggcgtgcttcgtttga 333
Query: 1115 gcggcttcaggatacggacggtcgcggatggctagcgaggaggacgtccgtggctgtttt 1174
|| ||| | | |||||| | ||||| ||||||| |||||| | ||||||||||| ||
Sbjct: 334 atggattcggcaaacggac--tagcggagggctagctaggaggccttccgtggctgtctt 391
Query: 1175 ggggggaggggggttcgccgctgaatgcggtgataggaaactcgggcctcttcggaggtc 1234
||||||| ||||||| |||||||||||||||| ||| |||||||||||||
Sbjct: 392 gggggga--ggggttc-acgctgaatgcggtgatgagaannnnnnnnctcttcggaggtc 448
Query: 1235 tgggtcgcttgatggccagttttcgctctgcctgtcgtcggacgcttgcgctcggcggtg 1294
||||||||||||||| | |||| | ||||| ||| |||||| |||||||||||||| |||
Sbjct: 449 tgggtcgcttgatggtcggtttccactctgtctgccgtcgggcgcttgcgctcggcagtg 508
Query: 1295 ggtagttcaagactggccgcgtgggcttgggtgggaggggcaaggggttaaccctcttgc 1354
|||| | || || | ||||||||| ||| |||| || | |||||||||||||||| ||
Sbjct: 509 ggta-tcca--accgaccgcgtgggtttgagtggaagctgtaaggggttaaccctctcgc 565
Query: 1355 gattaagcaagcccgccaggc 1375
|| |||||||||| |||||||
Sbjct: 566 gagtaagcaagcctgccaggc 586
Score = 97.6 bits (49), Expect = 6e-20
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1461 gtatgccttgcgcgattcccgtgtcgatccactaggcggg-agtgagagtgaccgctggt 1519
|||||| ||| |||||||||||||||||||||| |||||| | ||||||| |||||||||
Sbjct: 640 gtatgctttgtgcgattcccgtgtcgatccactgggcggggaatgagagtaaccgctggt 699
Query: 1520 gttttagtgggtagcat 1536
|||||||||||||||||
Sbjct: 700 gttttagtgggtagcat 716
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 197,761
Number of extensions: 3790
Number of successful extensions: 3790
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3789
Number of HSP's successfully gapped: 3
Length of query: 1891
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1874
Effective length of database: 8,119,229
Effective search space: 15215435146
Effective search space used: 15215435146
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)