BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02945 (UTR included)
(2866 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B1C11 1384 0.0
BF01047B2H03 163 2e-39
BF01060B1D11 159 3e-38
>BF01021B1C11
Length = 720
Score = 1384 bits (698), Expect = 0.0
Identities = 716/722 (99%), Gaps = 2/722 (0%)
Strand = Plus / Plus
Query: 1415 tcctaattgttacacgttttccaaaagactagctgagaatattgtagaaaatgaatatga 1474
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tcctaattgttacacgttttccaaaagactnnntgagaatattgtagaaaatgaatatga 60
Query: 1475 aaaccttcctgcggtggtcgtaaggccgagcatagtatgtccctctataaaggaacctgt 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaccttcctgcggtggtcgtaaggccgagcatagtatgtccctctataaaggaacctgt 120
Query: 1535 accagggtgggtggacagcctcaacggacctgtaggacttatgctcggtgctggtaaagg 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accagggtgggtggacagcctcaacggacctgtaggacttatgctcggtgctggtaaagg 180
Query: 1595 cgttataagaagtatgctttgcgatggaagtctcatcgcacaagttgttcccgttgatac 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgttataagaagtatgctttgcgatggaagtctcatcgcacaagttgttcccgttgatac 240
Query: 1655 ttgcataaatgcactcattgctatcggcatgatagaaggcaagagagaagataaagcaga 1714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgcataaatgcactcattgctatcggcatgatagaaggcaagagagaagataaagcaga 300
Query: 1715 gcttatgccagtgtataacgtaaacattggccatcaaaaaccaacaacgtggggagaagt 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcttatgccagtgtataacgtaaacattggccatcaaaaaccaacaacgtggggagaagt 360
Query: 1775 tctccaaattggtaaagattatggacgcaagtacccactggcttggccactgtggtaccc 1834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctccaaattggtaaagattatggacgcaagtacccactggcttggccactgtggtaccc 420
Query: 1835 taatggtgatatcacgacgaactacgtattgcatgaatttaaaagactattttatcacct 1894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taatggtgatatcacgacgaactacgtattgcatgaatttaaaagactattttatcacct 480
Query: 1895 attaccggcatattgcatagacttacttttattcttgttgagacaaccacgtttcatggt 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attaccggcatattgcatagacttacttttattcttgttgagacaaccacgtttcatggt 540
Query: 1955 acgtgttcaagaccgaataagccagggtttgcaagttttacaatactttacaatgagacc 2014
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 541 acgtgttcaagaccgaataagccagggtttgcaagttttacaatactttacaatgggacc 600
Query: 2015 atggactttcccgtgtccaaattttgatagtatacaatccaaattggacaaggaggaaca 2074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atggactttcccgtgtccaaattttgatagtatacaatccaaattggacaaggaggaaca 660
Query: 2075 agttatttttaatacagatttgacaacagctgaccgcgatgcttatttgcagcaatgtat 2134
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agt--tttttaatacagatttgacaacagctgaccgcgatgcttatttgcagcaatgtat 718
Query: 2135 tg 2136
||
Sbjct: 719 tg 720
>BF01047B2H03
Length = 758
Score = 163 bits (82), Expect = 2e-39
Identities = 167/194 (86%), Gaps = 1/194 (0%)
Strand = Plus / Minus
Query: 501 atgaatctaaaaaggctatcggagctctataaacacctaagagtttccaagagatacatc 560
|||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| | |||
Sbjct: 757 atgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatatc 698
Query: 561 ctggggaaatcccaggatgacgtcgttacatcgctcccaaaagacaaagatgccccagag 620
| ||||||| |||| |||| ||| ||||||| ||| ||||| | | ||||||||| ||
Sbjct: 697 ccggggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctgaa 638
Query: 621 ctagagtcaagacttcaattccaaaagcagtttatgatacaagcacaaaggaac-agagt 679
||| ||||||||||||||||||| || |||||||||||| ||||||||| ||| |||||
Sbjct: 637 ctaaagtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagagt 578
Query: 680 agggttagaatcaa 693
||| |||| |||||
Sbjct: 577 aggattaggatcaa 564
>BF01060B1D11
Length = 799
Score = 159 bits (80), Expect = 3e-38
Identities = 184/216 (85%), Gaps = 2/216 (0%)
Strand = Plus / Minus
Query: 480 agggatcgaaataattttggcatgaatctaaaaaggctatcggagctctataaacaccta 539
|||||||| |||| |||||| |||| ||||||||||| ||||||||||||||||||| ||
Sbjct: 607 agggatcgcaatagttttgggatgagtctaaaaaggccatcggagctctataaacactta 548
Query: 540 agagtttccaagagatacatcctggggaaatcccaggatgacgtcgttacatcgctccca 599
||||||||||||||| | |||| ||||||| |||| |||| ||| ||||||| ||||||
Sbjct: 547 agagtttccaagagacatatcccggggaaagcccataatgatgtcattacatcactccca 488
Query: 600 aaagacaaagatgccccagagctagagtc-aagacttcaattccaaaagcagtttatgat 658
||| | ||||| |||||| ||| |||| |||||||||||||| || |||||||||||
Sbjct: 487 aaaaccggagatggcccagaactaaagtctgagacttcaattccacaaacagtttatgat 428
Query: 659 acaagcacaaaggaac-agagtagggttagaatcaa 693
| ||||||||| ||| |||||||| |||| |||||
Sbjct: 427 aggagcacaaagtaacgagagtaggattaggatcaa 392
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,233
Number of extensions: 5243
Number of successful extensions: 5243
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5241
Number of HSP's successfully gapped: 3
Length of query: 2866
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2849
Effective length of database: 8,119,229
Effective search space: 23131683421
Effective search space used: 23131683421
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)