BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02959 (UTR included)
(1771 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B2E05 1453 0.0
>BF01033B2E05
Length = 800
Score = 1453 bits (733), Expect = 0.0
Identities = 783/800 (97%), Gaps = 1/800 (0%)
Strand = Plus / Plus
Query: 428 gtaaatattaagtgatattttacattaaaaagaaatatatat-ttaaaaaaacgccaaca 486
|||||||||||||||||||||||||||||||||||||||||| || |||||| |||| ||
Sbjct: 1 gtaaatattaagtgatattttacattaaaaagaaatatatatatttaaaaaaagccagca 60
Query: 487 gttacatatctaatatggagtggttttcgacagctgatggaaaatatagaatagagtctt 546
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 gttacatatcaaatatggagtggttttcgacagctgatggaaaatataggatagagtctt 120
Query: 547 tgtcgtcaattacatttccgggtgcattagaagttattcggacggctttttgtcaagatg 606
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtcgtcaattacatttcctggtgcattagaagttattcggacggctttttgtcaagatg 180
Query: 607 aatacgtatcgataggaagtgaggtaaataaaaatcctaaggctgctgaagaattgcttg 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatacgtatcgataggaagtgaggtaaataaaaatcctaaggctgctgaagaattgcttg 240
Query: 667 agctatgcgccgatgcagctctagacggcgtctccttggtaggagtaaacgttgaaactg 726
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 241 agctatgcgccgatgcagctctagatggcgtctccttggtagcagtaaacgttgaaactg 300
Query: 727 gagaagtcgctgctgtcgcttttaataagattcaggttaaggcaaatgacgcatctgaaa 786
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagaagtcgctgctgttgcttttaataagattcaggttaaggcaaatgacgcatctgaaa 360
Query: 787 aaccatttttcgtaattttttctgaagagcgatgcactcaagcatcgtcccgatcgctca 846
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaccatttttcgttattttttctgaagagcgatgcactcaagcatcgtcccgatcgctca 420
Query: 847 tagaatttatggccgacgttgatgagagatgcaatttatttgaaaagtacaaagttgact 906
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 421 tagaatttatggccgacgttgatgagagatgcaatttatttgaaaaatacaaagttgact 480
Query: 907 gtagtcttgagattatgtttttggctacattacgcaactacagaggacaaggcttaggaa 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtagtcttgagattatgtttttggctacattacgcaactacagaggacaaggcttaggaa 540
Query: 967 aacttcttacaaaatattccatagaagttgccaggaagtataaatacggtccaattgcgc 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacttcttacaaaatattccatagaagttgccaggaagtataaatacggtccaattgcgc 600
Query: 1027 cattgtgtccaaaagatctgggaccaaaatattccaatttaacttctcgcaaacctataa 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cattgtgtccaaaagatctgggaccaaaatattccaatttaacttctcgcaaacctataa 660
Query: 1087 atacatatcccaagatttgtcaagctatctggactggaagagcttctcagaatgtcggaa 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atacatatcccaagatttgtcaagctatctggactggaagagcttctcagaatgtcnnnn 720
Query: 1147 aagctcacagttttactgtgcacttgacagtacctttttcggaatttgttttcaatggca 1206
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 nagctcacagttttactgtgcacttgacagtacctttttcggaatttgttttcaatggca 780
Query: 1207 aaacttactccgagcgcatc 1226
||||||||||||||||||||
Sbjct: 781 aaacttactccgagcgcatc 800
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,264
Number of extensions: 6643
Number of successful extensions: 6643
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6639
Number of HSP's successfully gapped: 1
Length of query: 1771
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1754
Effective length of database: 8,119,229
Effective search space: 14241127666
Effective search space used: 14241127666
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)