BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02975 (UTR included)
(5323 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A1C07 1289 0.0
BF01060B2F06 1138 0.0
BF01045A2H02 174 9e-43
>BF01029A1C07
Length = 704
Score = 1289 bits (650), Expect = 0.0
Identities = 694/708 (98%), Gaps = 8/708 (1%)
Strand = Plus / Plus
Query: 4020 gtgaccggctacgacccgctcgactacagccccatactgaacgtgccggcgcagataaag 4079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaccggctacgacccgctcgactacagccccatactgaacgtgccggcgcagataaag 60
Query: 4080 gatttagaggctaaagatctaaagtacgtgtacactcggtctggcgtgtcggtgtggtgg 4139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatttagaggctaaagatctaaagtacgtgtacactcggtctggcgtgtcggtgtggtgg 120
Query: 4140 agcggggctgggccgcgagtggtgcggttcgcgcagaacataacacaaccgttggagacc 4199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcggggctgggccgcgagtggtgcggttcgcgcagaacataacacaaccgttggagacc 180
Query: 4200 tggagcgtcgttaacgttacagactcgagggttgagctcagcgttcctgacccgtcgcag 4259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggagcgtcgttaacgttacagactcgagggttgagctcagcgttcctgacccgtcgcag 240
Query: 4260 ccattgttcgtgatggtgacgagggcgggcggcgccaagcggcaccacgtgctgaccata 4319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccattgttcgtgatggtgacgagggcgggcggcgccaagcggcaccacgtgctgaccata 300
Query: 4320 cctcctaagcccacctccttcttctactactatttaggagcaggcgtgggcggcgcgctg 4379
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 301 cctcctaagcccacctccttcttctattactatttaggagcaggcgtgggcggcgcgctg 360
Query: 4380 tgtgtgtgtctgttgattgcgggattggtctttgtgtggagagttaaaacgaggcgaaac 4439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtgtgtgtctgttgattgcgggattggtctttgtgtggagagttaaaacgaggcgaaac 420
Query: 4440 aggtcggtgagaactgtgactgcgtcaggtgtcgaggaggaagcttccgagatgagggtg 4499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggtcggtgagaactgtgactgcgtcaggtgtcgaggaggaagcttccgagatgagggtg 480
Query: 4500 gcgcgagttgctaa----gccgccgcggcccctcccgctgctcaatggacacgtacacat 4555
|||||||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct: 481 gcgcgagttgctaacggcggcgccgggg----agccgctgctcaatggacacgtacacat 536
Query: 4556 cacagagaaccccgcgtccaaaacgacgaacatcagatccaagaaggcccgctgtgtgga 4615
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 537 cacagagaaccccgcgtccaaaacgacgaacatcagatccaagaagtcccgctgtgtgga 596
Query: 4616 gagccccgcctacgacgccttcgacctgtcaagacacgaggccgacacgaccatggagac 4675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gagccccgcctacgacgccttcgacctgtcaagacacgaggccgacacgaccatggagac 656
Query: 4676 ggtgctggacgacaccgccccctacaacctgctggacacctcgcgccg 4723
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggtgctggacgacaccgccccctacaacctgctggacacctcgcgccg 704
>BF01060B2F06
Length = 614
Score = 1138 bits (574), Expect = 0.0
Identities = 595/602 (98%)
Strand = Plus / Minus
Query: 2776 agagactcgctctggctggacggatcaatctccgtaagtccgccgacaggagccgcatcg 2835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agagactcgctctggctggacggatcaatctccgtaagtccgccgacaggagccgcatcg 543
Query: 2836 agctggtcatcagcggagtgacctccaacgacgcggggaactaccagtgtttcgcccagt 2895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agctggtcatcagcggagtgacctccaacgacgcggggaactaccagtgtttcgcccagt 483
Query: 2896 ccggcgagtcgtgggcgtcgtggtgggcgcgattggaggtgtcggggacgggtgcggcgg 2955
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccggcgagtcgtgggcgtcatggtgggcgcgattggaggtgtcggggacgggtgcggcgg 423
Query: 2956 ccccggcggccgtgtggtgcgcccccgcggccgtggcggcggtcgctctcagctggaccc 3015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ccccggcggccgtgtggtgcgcccccgcggccgtggcggcggtcgctctcagctggaccc 363
Query: 3016 ctcccaacaccaccgtcctggcatacaccgtggacaccacctccacggacaaagacggtg 3075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctcccaacaccaccgtcctggcatacaccgtggacaccacctccacggacaaagacggtg 303
Query: 3076 tggcgatgatcggtcaaccgaccaactacacggaggacattgtgaaggtcaaggaacccc 3135
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 302 tggcgatgatcggtcaaccgaccaactacacggaggacatcgtgaaggtcaaggaacccc 243
Query: 3136 tgactccgtacgtgttccaggtgcgagcctacgtcaagtcggatcacaacaacaggaacg 3195
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgacgccgtacgtgttccaggtgcgagcctacgtcaagtcggatcacaacaacaggaacg 183
Query: 3196 ttgccacggacatgtcggagagcgtcgtgtgccaaggacagggagtgcctataaccctct 3255
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 182 tggccacggacatgtcggagagcgtcgtgtgccaaggacagggagtgcctataacactct 123
Query: 3256 ctaagttggaagacgacaaggtgcaggtgtcgtggaagcagttcgccgatgagaaccctg 3315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctaagttggaagacgacaaggtgcaggtgtcgtggaagcagttcgccgatgagaaccctg 63
Query: 3316 gcgtggtgcagtggatcctgcagtaccgacaccagaactataccgacgaccagcacaacg 3375
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 62 gcgtggtgcagtggatcctgcagtaccgacaccaaaactacaccgacgaccagcacaacg 3
Query: 3376 tg 3377
||
Sbjct: 2 tg 1
Score = 733 bits (370), Expect = 0.0
Identities = 379/382 (99%)
Strand = Plus / Minus
Query: 1483 agagactcgctctggctggacggatcaatctccgtaagtccgccgacaggagccgcatcg 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agagactcgctctggctggacggatcaatctccgtaagtccgccgacaggagccgcatcg 543
Query: 1543 agctggtcatcagcggagtgacctccaacgacgcggggaactaccagtgtttcgcccagt 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agctggtcatcagcggagtgacctccaacgacgcggggaactaccagtgtttcgcccagt 483
Query: 1603 ccggcgagtcgtgggcgtcatggtgggcgcgattggaggtgtcggggacgggtgcggcgg 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccggcgagtcgtgggcgtcatggtgggcgcgattggaggtgtcggggacgggtgcggcgg 423
Query: 1663 ccccggcggccgtgtggtgcgcccccgcggccgtggcggcggtcgctctcagctggaccc 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ccccggcggccgtgtggtgcgcccccgcggccgtggcggcggtcgctctcagctggaccc 363
Query: 1723 ctcccaataccaccgtcctggcatacaccgtggacaccacctccacggacaaagacggtg 1782
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctcccaacaccaccgtcctggcatacaccgtggacaccacctccacggacaaagacggtg 303
Query: 1783 tggcgatgatcggtcaaccgaccaactacacggaggacattgtgaaggtcaaggaacccc 1842
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 302 tggcgatgatcggtcaaccgaccaactacacggaggacatcgtgaaggtcaaggaacccc 243
Query: 1843 tgactccgtacgtgttccaggt 1864
|||| |||||||||||||||||
Sbjct: 242 tgacgccgtacgtgttccaggt 221
Score = 174 bits (88), Expect = 9e-43
Identities = 94/96 (97%)
Strand = Plus / Minus
Query: 1925 tgttgcaggtgcgagcctacgtcaagtcggatcacaacaacaggaacgttgccacggaca 1984
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 230 tgttccaggtgcgagcctacgtcaagtcggatcacaacaacaggaacgtggccacggaca 171
Query: 1985 tgtcggagagcgtcgtgtgccaaggacagggagtgc 2020
||||||||||||||||||||||||||||||||||||
Sbjct: 170 tgtcggagagcgtcgtgtgccaaggacagggagtgc 135
>BF01045A2H02
Length = 816
Score = 174 bits (88), Expect = 9e-43
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 5236 gatcattcccctccacaccaggcagcgagtccgcgcgcccgtgcggcggggcggggcggg 5295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gatcattcccctccacaccaggcagcgagtccgcgcgcccgtgcggcggggcggggcggg 71
Query: 5296 gcgggcggtgtcggttcgtccgtggagc 5323
||||||||||||||||||||||||||||
Sbjct: 72 gcgggcggtgtcggttcgtccgtggagc 99
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 393,286
Number of extensions: 7411
Number of successful extensions: 7411
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7409
Number of HSP's successfully gapped: 6
Length of query: 5323
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5305
Effective length of database: 8,109,745
Effective search space: 43022197225
Effective search space used: 43022197225
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)