BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02981 (UTR included)
(2032 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A1E12 682 0.0
>BF01026A1E12
Length = 669
Score = 682 bits (344), Expect = 0.0
Identities = 363/369 (98%), Gaps = 1/369 (0%)
Strand = Plus / Plus
Query: 1665 ttatcgtctcgtcgcctcggcgaacgtcacga-ctgttcgtactagcgattaagttagct 1723
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 ttatcgtctcgtcgcctcggcgaacgtcannntctgttcgtactagcgattaagttagct 60
Query: 1724 ctctgtagttaatgtagtacttaattatgaagtaccgggcgtgctcgcatcgacgtccgt 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctgtagttaatgtagtacttaattatgaagtaccgggcgtgctcgcatcgacgtccgt 120
Query: 1784 gcggctcgtagataaatcaattgtataggtatcgatattcgacgctagtattagtgagat 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggctcgtagataaatcaattgtataggtatcgatattcgacgctagtattagtgagat 180
Query: 1844 gcatttctaggcgagtattcttagactgttccccgagcgagtcggccgactgcgacgtga 1903
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 gcatttctaggcgagtattcttagactgttccccgagcgagtcggccgactgcggcgtga 240
Query: 1904 ggtactgggggccaaactgtttcgcgcgagcgccgacgtccttgttgcggcgtgtccatg 1963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtactgggggccaaactgtttcgcgcgagcgccgacgtccttgttgcggcgtgtccatg 300
Query: 1964 ctgttttagacttgtcgtgtgcgcacgcgacgcgctcggcgccgcgacgctgactgcggg 2023
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgttttagacttgtcgtgtgcgcatgcgacgcgctcggcgccgcgacgctgactgcggg 360
Query: 2024 tttcctttt 2032
|||||||||
Sbjct: 361 tttcctttt 369
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 233,337
Number of extensions: 5445
Number of successful extensions: 5445
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5444
Number of HSP's successfully gapped: 1
Length of query: 2032
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2015
Effective length of database: 8,119,229
Effective search space: 16360246435
Effective search space used: 16360246435
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)