BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02988 (UTR included)
(1930 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B1F06 1386 0.0
>BF01005B1F06
Length = 703
Score = 1386 bits (699), Expect = 0.0
Identities = 702/703 (99%)
Strand = Plus / Plus
Query: 1219 ataaaatgacacaaggatatatcctctgcgtcaaagactatgacttcatgatattgaata 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaaatgacacaaggatatatcctctgcgtcaaagactatgacttcatgatattgaata 60
Query: 1279 acgcattcctcatccacaaaccgggtatcaaacattatgtaaagaatcccaaaagagacg 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgcattcctcatccacaaaccgggtatcaaacattatgtaaagaatcccaaaagagacg 120
Query: 1339 ccatcgctggccgacagtcgttgcttatcaaaagtattatcatgccgcaactaaaagctc 1398
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatcgctggccgacaatcgttgcttatcaaaagtattatcatgccgcaactaaaagctc 180
Query: 1399 tctttggggcgaggagcggctgtgctctgtgaccgaaaaaatataagataacgctgagag 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctttggggcgaggagcggctgtgctctgtgaccgaaaaaatataagataacgctgagag 240
Query: 1459 tggcataaagcagtgttagatgcagcatagaaatgttctgccaacatccatgttacaggg 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggcataaagcagtgttagatgcagcatagaaatgttctgccaacatccatgttacaggg 300
Query: 1519 tgcgtctttccgcctcagttttatagacatttacagatagcgatggttatagactagaca 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcgtctttccgcctcagttttatagacatttacagatagcgatggttatagactagaca 360
Query: 1579 tatcattaagtaatgtttaaattaagccaacgtcaataagtccttcgattccgtgtcact 1638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatcattaagtaatgtttaaattaagccaacgtcaataagtccttcgattccgtgtcact 420
Query: 1639 acgacttgtgaagtaacacagtgcctatatcgaaagtgtattttgtaattgactctgagt 1698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgacttgtgaagtaacacagtgcctatatcgaaagtgtattttgtaattgactctgagt 480
Query: 1699 tttcataacgaatggttaaaccgaattttatagactataccttctaatcgaggcctaata 1758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttcataacgaatggttaaaccgaattttatagactataccttctaatcgaggcctaata 540
Query: 1759 ttataattgtgttagaggtcatttttatttaatgtaaatattatatgttctaaattcgag 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttataattgtgttagaggtcatttttatttaatgtaaatattatatgttctaaattcgag 600
Query: 1819 gcttaatttagtttcagtaaagaagtcacttgactgttgtatttaagtggttctttacat 1878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcttaatttagtttcagtaaagaagtcacttgactgttgtatttaagtggttctttacat 660
Query: 1879 gactagcagattaagcttttatatctaataacgcttctattat 1921
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gactagcagattaagcttttatatctaataacgcttctattat 703
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 291,759
Number of extensions: 24138
Number of successful extensions: 24138
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 24138
Number of HSP's successfully gapped: 1
Length of query: 1930
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1913
Effective length of database: 8,119,229
Effective search space: 15532085077
Effective search space used: 15532085077
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)