BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02996 (UTR included)
(2821 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A1E11 971 0.0
BF01031B2E07 260 1e-68
>BF01029A1E11
Length = 664
Score = 971 bits (490), Expect = 0.0
Identities = 496/498 (99%)
Strand = Plus / Plus
Query: 558 gatcaatatgataacttagccacccatactcataaaggtatcgaattcttagataaatat 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gatcaatatgataacttagccacccatactcataaaggtatcgaattcttagataaatat 226
Query: 618 gggaattttgtgaaggaacggtgtgctatagagttagaatatgctggcaaattaaggagg 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gggaattttgtgaaggaacggtgtgctatagagttagaatatgctggcaaattaaggagg 286
Query: 678 cttgtgaagagctatcaaccaaaaagaaaggaagaagacgaatacgtatatacatcatgt 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cttgtgaagagctatcaaccaaaaagaaaggaagaagacgaatacgtatatacatcatgt 346
Query: 738 aaagcattcagacagctccttcaggagttgggtgattttgctggtcagagggagttggtg 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aaagcattcagacagctccttcaggagttgggtgattttgctggtcagagggagttggtg 406
Query: 798 gctgagaatttacagtcgaacgttgtacgagagttacatttactagctaaggagctgaga 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gctgagaatttacagtcgaacgttgtacgagagttacatttactagctaaggagctgaga 466
Query: 858 gaggctaggaagggacacttaaacgacggttcaaagcaaatggccgtccttagtacggcc 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gaggctaggaagggacacttaaacgacggttcaaagcaaatggccgtccttagtacggcc 526
Query: 918 gtgggagcgttggagcgtgcgcgtcgttcatacgagagggcggcgcgggagtcggagcgt 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gtgggagcgttggagcgtgcgcgtcgttcatacgagagggcggcgcgggagtcggagcgt 586
Query: 978 gcactggaagccttccagcgagcggacgcagacctgcacctcagtcgggccgaggtcgag 1037
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 587 gcactggaagccttccagcgggcggacgcggacctgcacctcagtcgggccgaggtcgag 646
Query: 1038 aaacagaagatgaacatg 1055
||||||||||||||||||
Sbjct: 647 aaacagaagatgaacatg 664
>BF01031B2E07
Length = 677
Score = 260 bits (131), Expect = 1e-68
Identities = 134/135 (99%)
Strand = Plus / Plus
Query: 1513 agaataacttgtcggtcgatggaaaggaggattattcagatttaccgcccaaccagaaga 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agaataacttgtcggtcgatggaaaggaggattattcagatttaccgcccaaccagaaga 602
Query: 1573 aaaagaaactgctagctaaagtacacgaattgaccaagcaggttggccaagaacaagctg 1632
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 aaaagaaacttctagctaaagtacacgaattgaccaagcaggttggccaagaacaagctg 662
Query: 1633 ctatggagggtctta 1647
|||||||||||||||
Sbjct: 663 ctatggagggtctta 677
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 320,239
Number of extensions: 7022
Number of successful extensions: 7022
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7022
Number of HSP's successfully gapped: 2
Length of query: 2821
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2804
Effective length of database: 8,119,229
Effective search space: 22766318116
Effective search space used: 22766318116
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)