BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03020 (UTR included)
(1618 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024B2D08 936 0.0
BF01045B1F01 78 5e-14
>BF01024B2D08
Length = 709
Score = 936 bits (472), Expect = 0.0
Identities = 480/484 (99%)
Strand = Plus / Plus
Query: 474 tcgaagcgagagtaaattttgattgtcatgcctcatagtcattgccatggacatgatcat 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tcgaagcgagagtaaattttgattgtcatgcctcatagtcattgccatggacatgatcat 285
Query: 534 gaccacggaagttcagatgagctaggtctgcaatataatctttttgaaaaaatagataaa 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gaccacggaagttcagatgagctaggtctgcaatataatctttttgaaaaaatagataaa 345
Query: 594 gaaaatctgcaatgcctcaatgaaagtgttgatggagctggaaaaacagtatttaagcca 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaaaatctgcaatgcctcaatgaaagtgttgatggagctggaaaaacagtatttaagcca 405
Query: 654 tggaataatcgtctagatagaatacattatgtcgaaagtgatgctgatgaggagttattg 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tggaataatcgtctagatagaatacattatgtcgaaagtgatgctgatgaggagttattg 465
Query: 714 tttaatattcccttcacaggcaatatcaaactgaaaggcataagaatagcttcagaggaa 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tttaatattcccttcacaggcaatatcaaactgaaaggcataagaatagcttcagaggaa 525
Query: 774 actgaagcacacccttctaaattaaggctcttcaaaaacaaacccaatatgacatttgat 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 actgaagcacacccttctaaattaaggctcttcaaaaacaaacccaatatgacatttgat 585
Query: 834 gatgttactttggaacctgatcaagtgtttgacctgcaaaaggacagtgaaggcattgtt 893
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 586 gatgttactttggaacctgatcaagtgtttgacctgcanannnacagtgaaggcattgtt 645
Query: 894 gagtacagtccaaaaattgtcacattctcatctgtatcacatttgactatgcattttccc 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gagtacagtccaaaaattgtcacattctcatctgtatcacatttgactatgcattttccc 705
Query: 954 aaca 957
||||
Sbjct: 706 aaca 709
Score = 422 bits (213), Expect = e-118
Identities = 222/225 (98%)
Strand = Plus / Plus
Query: 177 gactgcaacttgcaagtgctaaaattgaaatttattgaagtcgagcctggttgagttggt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gactgcaacttgcaagtgctaaaattgaaatttattgaagtcgagcctggttgagttggt 60
Query: 237 tgaagttgagcctaccaaaagtttaaatcaaaatatttctgttttaattaaaattgtaga 296
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 tgaagttgagtctaccaaaagtttaaaacaaaatatttctgttttaattaaaattgtaga 120
Query: 297 aaatactcatagtccaaatagtatttatggtttgtttgaattgatttttactaatttatt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatactcatagtccaaatagtatttatggtttgtttgaattgatttttactaatttatt 180
Query: 357 tcataaatcgctgaatcatcattttttgggaccgttcaaaacaaa 401
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 tcataaatcgctgaatcatcattttttgggaccgttaaaaacaaa 225
>BF01045B1F01
Length = 805
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 1233 agctgtgcccgcgactttgttctcgtagaaaaagtaccttaatacaaaatttcttcata 1291
|||||||||||||||||||||| || |||||||||| |||| |||||||||| ||||||
Sbjct: 681 agctgtgcccgcgactttgttcacggagaaaaagtaacttactacaaaatttattcata 739
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 213,572
Number of extensions: 4521
Number of successful extensions: 4521
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4521
Number of HSP's successfully gapped: 3
Length of query: 1618
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1601
Effective length of database: 8,119,229
Effective search space: 12998885629
Effective search space used: 12998885629
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)