BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03032 (UTR included)
(2956 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A1H10 993 0.0
BF01052A2H01 226 2e-58
>BF01017A1H10
Length = 531
Score = 993 bits (501), Expect = 0.0
Identities = 504/505 (99%)
Strand = Plus / Plus
Query: 1221 gaagatgaagaggaagcagaggagaccccagataaacccaaaaaaaagaaggccaaaaag 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagatgaagaggaagcagaggagaccccagataaacccaaaaaaaagaaggccaaaaag 60
Query: 1281 gacaatatttttctcaaaaaacctaaatctgatcccaatgcaccaccaaatgacagaatt 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacaatatttttctcaaaaaacctaaatctgatcccaatgcaccaccaaatgacagaatt 120
Query: 1341 cccttgccagagttaaaagaaacagacaagctggaaaagggtaaagccataagagaagct 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccttgccagagttaaaagaaacagacaagctggaaaagggtaaagccataagagaagct 180
Query: 1401 gcaaaacgtgttcaacttggaccagagagtctaccatctatttgcttttacactctctta 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaaaacgtgttcaacttggaccagagagtctaccatctatttgcttttacactctctta 240
Query: 1461 aacagcggccatacagccatatgtgctgatatctgtgatgactcaacactgcttgccgtt 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacagcggccatacagccatatgtgctgatatctgtgatgactcaacactgcttgccgtt 300
Query: 1521 ggcttcaacaactcttatattaaggtttggactttgactacaataagattaagaggaatg 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcttcaacaactcttatattaaggtttggactttgactacaataagattaagaggaatg 360
Query: 1581 aaatcagctgaaaagttgcaagacatcgacagagaagctggtgacgtcttagtgaggatg 1640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaatcagctgaaaagttgcaagacatcgacagagaagctggtgacgtcttagtgaggatg 420
Query: 1641 atggaagagaaggacagagatacatgccgtacactatacggccactcgggatcagtattc 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atggaagagaaggacagagatacatgccgtacactatacggccactcgggatcagtattc 480
Query: 1701 aaagtggcattcgatcctttcaaaa 1725
||||| |||||||||||||||||||
Sbjct: 481 aaagtcgcattcgatcctttcaaaa 505
>BF01052A2H01
Length = 296
Score = 226 bits (114), Expect = 2e-58
Identities = 114/114 (100%)
Strand = Plus / Minus
Query: 1953 tgtgttcaattccatccaaactcgaattacatagcaacgggatccagcgaccgcaccgta 2012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tgtgttcaattccatccaaactcgaattacatagcaacgggatccagcgaccgcaccgta 85
Query: 2013 agactatgggactgtttgacgggaacgcaagtacggatcatgaccggtcacaag 2066
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 agactatgggactgtttgacgggaacgcaagtacggatcatgaccggtcacaag 31
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 334,904
Number of extensions: 5757
Number of successful extensions: 5757
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5757
Number of HSP's successfully gapped: 2
Length of query: 2956
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2938
Effective length of database: 8,109,745
Effective search space: 23826430810
Effective search space used: 23826430810
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)