BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03035 (UTR included)
(1414 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1E04 319 7e-87
BF14_335_C2 129 1e-29
BF01060B1D11 101 3e-21
BF14_335_C4 88 4e-17
BF01016B1E06 86 2e-16
BF01043B1E03 82 3e-15
BF01047B2H03 82 3e-15
BF01037A2H12 68 4e-11
BF01021A2B11 68 4e-11
>BF01012A1E04
Length = 841
Score = 319 bits (161), Expect = 7e-87
Identities = 253/282 (89%), Gaps = 10/282 (3%)
Strand = Plus / Minus
Query: 237 aaaaattcgtctaaatctgcaccaggacccgatggtatcccatattatagtatttaaaaa 296
||||| |||||||||||||| || ||||||||||||||||||||| ||||| ||||||||
Sbjct: 451 aaaaaatcgtctaaatctgcgccgggacccgatggtatcccatat-atagtctttaaaaa 393
Query: 297 a-tgtccatcggttcgtaaacatcttagaaatatatacgataaaacgataaaatctggtc 355
| ||||||||||||||||||||||| | | ||||||||||||||| |||||||
Sbjct: 392 aatgtccatcggttcgtaaacatctcacatatatatacgataaaa--------tctggtc 341
Query: 356 aaggaagcaaatcccggagtccttcgggaaagcaatctttgtcctcgttcccaaaaaaga 415
|||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||
Sbjct: 340 aaggaagcaaatcccggagtgcttcgggaaagcaatttttgtcctcattcccaaaaaaga 281
Query: 416 tcgagttacggatccgaaagatactagaccgatagccttaacaaaaaccgtagctaaaat 475
|||||| || ||||||||||||||||||||||||||||||||||| || || | |||||
Sbjct: 280 tcgagtcacagatccgaaagatactagaccgatagccttaacaaatactatatccaaaat 221
Query: 476 ctttttctcagtcctacaaacgagaatgacgcgtttcatgct 517
|||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 220 ctttttctcagttctacaaacgagaatgacgcgattcatgct 179
>BF14_335_C2
Length = 1827
Score = 129 bits (65), Expect = 1e-29
Identities = 127/147 (86%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 819 aaatctttctacaacctgctaaaagacttaggcctgtcaagaactaacatcagttcattc 878
|||||| |||||| ||| |||||| |||| |||||||| |||||||||| ||||||||||
Sbjct: 1091 aaatctctctacagcctactaaaatacttgggcctgtccagaactaacaccagttcattc 1032
Query: 879 ttgaaatgtgcgtcgaaggcagccctagcaggctagtttcaaatttggttaggcagagag 938
|| || || | |||||| |||| |||| ||| | ||||||||||||||||| |||||
Sbjct: 1031 ttcgaacgtacttcgaagacagctctagtaggttcgtttcaaatttggttag---gagag 975
Query: 939 aggagcttggacggtggaggtgagcgt 965
|||||||||||||||||||||||||||
Sbjct: 974 aggagcttggacggtggaggtgagcgt 948
>BF01060B1D11
Length = 799
Score = 101 bits (51), Expect = 3e-21
Identities = 100/116 (86%), Gaps = 4/116 (3%)
Strand = Plus / Minus
Query: 676 tcccagatcagagtaatttagtaagatggg----gaaaaggcactgaaaaaacttgctac 731
|||||||||||||||||||||||||| ||| | |||| || ||||||||||||||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctat 175
Query: 732 ttttgcggggaggcagttggaactgctaagcatttgctggtgggatgtaggttact 787
|||||| | |||||||||||| |||||||||||||||| ||||||||||| ||||
Sbjct: 174 atttgcgagaaggcagttggaattgctaagcatttgctgatgggatgtaggctact 119
>BF14_335_C4
Length = 1491
Score = 87.7 bits (44), Expect = 4e-17
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 874 cattcttgaaatgtgcgtcgaaggcagccctagcaggctagtttcaaatttggttaggca 933
|||||||| || ||| ||| ||||||||||||||||| | | |||| ||||||||||| |
Sbjct: 1135 cattcttggaacgtgagtctaaggcagccctagcaggatcgattcatatttggttaggta 1194
Query: 934 gagagaggagcttggacggtggaggtgagcgt 965
|||||||||||||||| || |||||||||||
Sbjct: 1195 gagagaggagcttggaaagttgaggtgagcgt 1226
>BF01016B1E06
Length = 606
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 915 tttcaaatttggttaggcagagagaggagcttggacggtggaggtgagcgt 965
||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgt 273
>BF01043B1E03
Length = 830
Score = 81.8 bits (41), Expect = 3e-15
Identities = 118/143 (82%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 821 atctttctacaacctgctaaaagacttaggcctgtcaagaactaacatcagttcattctt 880
|||| |||||||||| || ||| |||| ||||| | ||||||||||||| ||||||||
Sbjct: 229 atctctctacaacctactgaaacacttgagcctgcccagaactaacatcaaatcattctt 288
Query: 881 gaaatgtgcgtcgaaggcagccctagcaggctagtttcaaatttggttaggcagagagag 940
| || || | | ||||||| ||||| | | |||||||||||||||||| ||||||||
Sbjct: 289 ggaacgtactgcaaaggcaggcctag---gtttgtttcaaatttggttaggtagagagag 345
Query: 941 gagcttggacggtggaggtgagc 963
|| ||||||| ||||||||||||
Sbjct: 346 gaccttggacagtggaggtgagc 368
>BF01047B2H03
Length = 758
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 722 aacttgctacttttgcggggaggcagttggaactgctaagcatttgctggtgggatgtag 781
||||||||| | |||| |||||||||||||| |||| ||||||||||| ||||||||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 782 gttactcctagatagcg 798
| ||||||| |||||||
Sbjct: 305 gctactcctggatagcg 289
>BF01037A2H12
Length = 773
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 815 agccaaatctttctacaacctgctaaaagacttaggcctgtcaagaactaacatcagttc 874
|||||||||| || ||||||||||||||||||| | | || ||||| |||||||||||||
Sbjct: 709 agccaaatctctcgacaacctgctaaaagactt-gccttgccaagagctaacatcagttc 767
Query: 875 attctt 880
||||||
Sbjct: 768 attctt 773
>BF01021A2B11
Length = 729
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/49 (93%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 917 tcaaatttggttaggcagagagaggagcttggacggtggaggtgagcgt 965
||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 357 tcaaatttggttaggaagag--aggagcttggacggtggaggtgagcgt 403
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 161,116
Number of extensions: 2841
Number of successful extensions: 2841
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 2837
Number of HSP's successfully gapped: 10
Length of query: 1414
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1397
Effective length of database: 8,119,229
Effective search space: 11342562913
Effective search space used: 11342562913
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)