BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03049 (UTR included)
(3520 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038A1A05 906 0.0
BF14_2430_C1 131 8e-30
BF01025B1E11 123 2e-27
BF14_1645_C1 123 2e-27
BF14_1695_C1 113 2e-24
BF14_3240_C1 88 1e-16
BF01051A1D12 72 7e-12
BF14_1708_C1 70 3e-11
>BF01038A1A05
Length = 718
Score = 906 bits (457), Expect = 0.0
Identities = 463/465 (99%)
Strand = Plus / Minus
Query: 3056 aaggtacaaattatacagatagcaagaaagcaatcaaaaatcgtgtatatttatgtatac 3115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aaggtacaaattatacagatagcaagaaagcaatcaaaaatcgtgtatatttatgtatac 659
Query: 3116 attacatttagtattattatttagaattatataaataggtagctatgttgttttgtttaa 3175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 attacatttagtattattatttagaattatataaataggtagctatgttgttttgtttaa 599
Query: 3176 gttttaattattattaaaattacttagtatttttcaaatacaataatataatacattata 3235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gttttaattattattaaaattacttagtatttttcaaatacaataatataatacattata 539
Query: 3236 ataatccaatttcaatatattactcatagttttgcttattgaacacatattcaaaaaaaa 3295
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 538 ataatccaatttcaatatattactcatagttttgcttattgaacacatattagaaaaaaa 479
Query: 3296 aaactaatgtttaaataatatatgtgataaagtgttatacataatcaaagtaaaagtgat 3355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aaactaatgtttaaataatatatgtgataaagtgttatacataatcaaagtaaaagtgat 419
Query: 3356 tttaacattaatatgattgaatgattaataacctgtcataatagtacaatctgttataat 3415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tttaacattaatatgattgaatgattaataacctgtcataatagtacaatctgttataat 359
Query: 3416 tagatctagaaaataagataaacgagtttaaatgttacactactattaaataattatttt 3475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tagatctagaaaataagataaacgagtttaaatgttacactactattaaataattatttt 299
Query: 3476 tgtaagaccatgtttttcttggaacaaagctatatcctcctcttt 3520
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tgtaagaccatgtttttcttggaacaaagctatatcctcctcttt 254
>BF14_2430_C1
Length = 830
Score = 131 bits (66), Expect = 8e-30
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 275 ctgttaaattttattttattcaaaagtcaatcccagatcgtgtctcctcgattctacatg 334
||||||||| ||||| |||||| |||| |||||| |||||||| ||||| |||||||| |
Sbjct: 122 ctgttaaatcttattgtattcataagttaatcccggatcgtgtttcctccattctacacg 181
Query: 335 acactggtagaatatactgtgcacgtctttgcacgaatgaaggccatatt 384
||||||| |||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 182 acactggcagaatatactgtgcacatctttgcacgtatgaaggccatatt 231
>BF01025B1E11
Length = 786
Score = 123 bits (62), Expect = 2e-27
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 275 ctgttaaattttattttattcaaaagtcaatcccagatcgtgtctcctcgattctacatg 334
|||| ||||||||||| |||||||||| |||||| |||||||| ||||| |||||||| |
Sbjct: 158 ctgtaaaattttatttcattcaaaagttaatcccggatcgtgtttcctccattctacacg 217
Query: 335 acactggtagaatatactgtgcacgtctttgcacgaatgaaggccatatt 384
| ||||| |||||||| |||||||||| ||||||| ||||||||||||||
Sbjct: 218 atactggcagaatatattgtgcacgtccttgcacggatgaaggccatatt 267
>BF14_1645_C1
Length = 793
Score = 123 bits (62), Expect = 2e-27
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 292 attcaaaagtcaatcccagatcgtgtctcctcgattctacatgacactggtagaatatac 351
|||||||||| |||||| ||||||| |||||| |||||||| |||||||| |||||||||
Sbjct: 89 attcaaaagttaatcccggatcgtgcctcctccattctacacgacactggcagaatatac 148
Query: 352 tgtgcacgtctttgcacgaatgaaggccatattataaaaaaa 393
|||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 149 tgtgcacgtcttggcacgggtgaaggccataatataaaaaaa 190
>BF14_1695_C1
Length = 1407
Score = 113 bits (57), Expect = 2e-24
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 325 attctacatgacactggtagaatatactgtgcacgtctttgcacgaatgaaggccatatt 384
||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1179 attctacatgacactggcagaatatactgtgcacgtctttgcacggatgaatgccatatt 1238
Query: 385 ataaaaaaa 393
|||||||||
Sbjct: 1239 ataaaaaaa 1247
>BF14_3240_C1
Length = 2110
Score = 87.7 bits (44), Expect = 1e-16
Identities = 94/110 (85%), Gaps = 3/110 (2%)
Strand = Plus / Plus
Query: 278 ttaaattttattttattcaaaagtcaatcccagatcgtgtctcctcgattctacatgaca 337
||||||||||||| || |||||||||||||| ||||| | ||| |||||||| | ||
Sbjct: 1570 ttaaattttatttcatacaaaagtcaatcccggatcgcgcatcc---attctacacggca 1626
Query: 338 ctggtagaatatactgtgcacgtctttgcacgaatgaaggccatattata 387
|||| ||||||||||||||| ||| |||||| |||||||||||||||||
Sbjct: 1627 ctggcggaatatactgtgcacttctctgcacggatgaaggccatattata 1676
>BF01051A1D12
Length = 812
Score = 71.9 bits (36), Expect = 7e-12
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 275 ctgttaaattttattttattcaaaagtcaatcccagatcgtgtctcctcgattctacatg 334
||||||||||||||| ||| |||| |||||| |||||||||| || || ||||| |
Sbjct: 183 ctgttaaattttattccatttctaagttaatcccggatcgtgtctaatctatgctacacg 242
Query: 335 acactggtagaatatactgtgcacgtctttgcacgaatgaaggc 378
||||||| |||||| ||||| |||||| ||||||| ||||||||
Sbjct: 243 acactggcagaatagactgtacacgtccttgcacggatgaaggc 286
>BF14_1708_C1
Length = 1276
Score = 69.9 bits (35), Expect = 3e-11
Identities = 61/69 (88%), Gaps = 3/69 (4%)
Strand = Plus / Plus
Query: 325 attctacatgacactggtagaatatactgtgcacgtctttgcacgaatgaaggccatatt 384
|||||||||| |||||| |||||||||||||| | | |||||| ||||||||||||||
Sbjct: 766 attctacatgtcactggcagaatatactgtgcgc---tctgcacggatgaaggccatatt 822
Query: 385 ataaaaaaa 393
|||||||||
Sbjct: 823 ataaaaaaa 831
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 529,710
Number of extensions: 12140
Number of successful extensions: 12140
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 12139
Number of HSP's successfully gapped: 8
Length of query: 3520
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3502
Effective length of database: 8,109,745
Effective search space: 28400326990
Effective search space used: 28400326990
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)