BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03062 (UTR included)
(8233 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046A1F09 1449 0.0
>BF01046A1F09
Length = 784
Score = 1449 bits (731), Expect = 0.0
Identities = 770/784 (98%)
Strand = Plus / Plus
Query: 2767 tagaaaaatataaaatagaaactggaagatcaaacgaatcgaggacggcggaagctagca 2826
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 tagaaaaatataatatagaaactggaagatcaaannnatcgaggacggcggaagctagca 60
Query: 2827 aaatgttccaatcaacaaggaagattttgaaaaacgataaatggagtaatttgtttgttg 2886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatgttccaatcaacaaggaagattttgaaaaacgataaatggagtaatttgtttgttg 120
Query: 2887 agaatttacgagatttattgttattgacagctgagagtgttagcgatcacgacgatgcct 2946
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaatttaggagatttattgttattgacagctgagagtgttagcgatcacgacgatgcct 180
Query: 2947 ctcggctgttcggtttccagttgatgaacagaactgattcgtacacatattcgaaacacg 3006
|||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 181 ctcggctgtttggtttccagttgattaacagaactgattcttacacatattcgaaacacg 240
Query: 3007 tgttttccggtatattggaatattttggggaactcatcgatggatgtatcatgcaatatt 3066
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgttttccggtatattggaatatattggggaactcatcgatggatgtatcatgcaatatt 300
Query: 3067 tatgtgaaaatcagccgctggttcttcttaacgtcctattcaagttatggaatagagtat 3126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatgtgaaaatcagccgctggttcttcttaacgtcctattcaagttatggaatagagtat 360
Query: 3127 tacgtgaaaaaattttcgcgtacagacttttggcctttcatgcttacttggtgttcatag 3186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacgtgaaaaaattttcgcgtacagacttttggcctttcatgcttacttggtgttcatag 420
Query: 3187 acaagattccgttcggctatccatccgatgcgattctctacacatttgcctgcgtcagta 3246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaagattccgttcggctatccatccgatgcgattctctacacatttgcctgcgtcagta 480
Query: 3247 tatgtaacgctttgaaggaatccaatacaaatgatgatgtaaaaatcttcgtcgatggtt 3306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tatgtaacgctttgaaggaatccaatacaaatgatgatgtaaaaatcttcgtcgatggtt 540
Query: 3307 tacaaaaaatatcaaaaagagtcacggacaattggacaatgtgtaacgaaaaatctaaaa 3366
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 541 tacaaaaaatatcaaaaagagttacggacaattggacaatgtgtaatgaaaaatctaaaa 600
Query: 3367 agttgatgatgtcaaaaataataacaattttagatttaaagatctcagagggttttgacg 3426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agttgatgatgtcaaaaataataacaattttagatttaaagatctcagagggttttgacg 660
Query: 3427 aatgcgatgggttattatgttatatcacagaggatataaaaaaagagtttgcggagaacg 3486
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aatgcgacggattattatgttatatcacagaggatataaaaaaagagtttgcggagaacg 720
Query: 3487 aggatgtagtggattatatgaaagttatgtctcagggtacatcgaagatgcatccaatga 3546
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 721 aggatgtagtggattatatgaaagttatgtctcagggtacatcgacgatgcatccaatga 780
Query: 3547 tgtc 3550
||||
Sbjct: 781 tgtc 784
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 140,006
Number of extensions: 16738
Number of successful extensions: 16738
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 16738
Number of HSP's successfully gapped: 1
Length of query: 8233
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 8215
Effective length of database: 8,109,745
Effective search space: 66621555175
Effective search space used: 66621555175
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)