BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03066 (UTR included)
(2287 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B2E03 1477 0.0
>BF01045B2E03
Length = 819
Score = 1477 bits (745), Expect = 0.0
Identities = 774/785 (98%)
Strand = Plus / Plus
Query: 357 cggaaagatggcgggaaaaaagtttgacgatgttctgaggaaatcgcggttttattaagt 416
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 cggatagatggcgggaaaaaagtttgacgatgttctgaggaaatcgcggttttattaagt 94
Query: 417 gatcacaatatatcaataaattttatatatatcagtaaagttatgagttacgctatttga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gatcacaatatatcaataaattttatatatatcagtaaagttatgagttacgctatttga 154
Query: 477 atgaagaggtagtgcgcttcaaagatgaagttgttcaagaggaggctgtcctttgccgga 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 atgaagaggtagtgcgcttcaaagatgaagttgttcaagaggaggctgtcctttgccgga 214
Query: 537 gataaacacggacgagcgtcccattcagatgatccttttgaacatgaggataaagcaaga 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gataaacacggacgagcgtcccattcagatgatccttttgaacatgaggataaagcaaga 274
Query: 597 ttttcggacacaagctggcagattcatcgaacctggagtcgaaatggtgatccgctccga 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttttcggacacaagctggcagattcatcgaacctggagtcgaaatggtgatccgctccga 334
Query: 657 ctgtcgccaccacccatgcgacaagacaccacaatctcttccgctgcaactaccgcctca 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctgtcgccaccacccatgcgacaagacaccacaatctcttccgctgcaactaccgcctca 394
Query: 717 cctttacgaaacgaccagaatggcatctatgacaccatcacgacccgagccgtcagcgcc 776
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cctttacgaaacgacctgaatggcatctatgacaccatcacgacccgagccgtcagcgcc 454
Query: 777 ccagcaaccccggccactgctgcttttgaaagggaacatgaaggccttcgatctgtcagt 836
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ccagcaaccccggcgactgcagcttttgaaagggaacatgaaggccttcgatctgtcagt 514
Query: 837 tatcctggtccaggtggatctgggacccggttagacctgtgttacgttgcggagcggatg 896
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tatcctggcccaggtggatctgggacccggttagacctgtgttacgttgcggagcggatg 574
Query: 897 ctggctctacatcttcctgatagagacgcacatgcagaggcacaagccgcacacatgctt 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ctggctctacatcttcctgatagagacgcacatgcagaggcacaagccgcacacatgctt 634
Query: 957 aataataaacacggagaacattatatggtattcgaagtaagtggaagtgatacgagtggc 1016
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 635 aataataaacacggagaacattatatggtattcgaagtaagtggaagtgatacgagcggc 694
Query: 1017 gatggtcgagtggctcgaggagtgttcggtcgcgctcggtccctgggctggccgggggac 1076
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 695 gatggtcgagtggctcgaggagtgttcggtcgcgctcggtcgctgggctggccgggggac 754
Query: 1077 ctggcgccgccgctggagagactctgcgccgcctgcaaacacatcgagagctggctcgcg 1136
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ctggcgccgccgctggnnnnactctgcgccgcctgcaaacacatcgagagctggctcgcg 814
Query: 1137 gctca 1141
|||||
Sbjct: 815 gctca 819
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,802
Number of extensions: 4257
Number of successful extensions: 4257
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4257
Number of HSP's successfully gapped: 1
Length of query: 2287
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2270
Effective length of database: 8,119,229
Effective search space: 18430649830
Effective search space used: 18430649830
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)