BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03086 (UTR included)
(1588 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2857_C1 1782 0.0
>BF14_2857_C1
Length = 943
Score = 1782 bits (899), Expect = 0.0
Identities = 916/921 (99%), Gaps = 1/921 (0%)
Strand = Plus / Plus
Query: 499 agatgtcgtcaggaagaccgattaaatgtgttgtagtgggcgatggcacagttggaaaaa 558
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 agatgtcnncaggaagaccgattaaatgtgttgtagtgggcgatggcacagttggaaaaa 83
Query: 559 catgcatgttgatatcttacactactgatagttttcctggcgaatatgtgcctacagtat 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 catgcatgttgatatcttacactactgatagttttcctggcgaatatgtgcctacagtat 143
Query: 619 ttgataattattcagcaccaatggttgtggacggagtggctgtgtcactaggactatggg 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ttgataattattcagcaccaatggttgtggacggagtggctgtgtcactaggactatggg 203
Query: 679 atacagctggccaagaagattatgatagactaagacctttaagttacccacaaactgatg 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atacagctggccaagaagattatgatagactaagacctttaagttacccacaaactgatg 263
Query: 739 tcttccttatatgttttagtgtcaccagcccttcatcttatgaaaacgtaacttcaaagt 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcttccttatatgttttagtgtcaccagcccttcatcttatgaaaacgtaacttcaaagt 323
Query: 799 ggtatccagaaataaaacatcattgtcctgatgcacctattatcctggttggtacaaaaa 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggtatccagaaataaaacatcattgtcctgatgcacctattatcctggttggtacaaaaa 383
Query: 859 ttgatttaagagatgatcgtgagacactaagtcttttgtcagaacaaggaatgtctccat 918
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 384 ttgatttaagagatgatcgtgagacacttagtcttttgtcagaacaaggaatgtctccat 443
Query: 919 tgaagagggaacaaggacaaaaattggcaaataagataagagctgtaaagtatatggagt 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaagagggaacaaggacaaaaattggcaaataagataagagctgtaaagtatatggagt 503
Query: 979 gttcggctttgacacagcgcggccttaagcaggtatttgatgaagccgtgcgtgcagtgt 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gttcggctttgacacagcgcggccttaagcaggtatttgatgaagccgtgcgtgcagtgt 563
Query: 1039 tacggccagagcctcagaagagacaccaaaggaagtgtttaattatgtaaatatggcaca 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tacggccagagcctcagaagagacaccaaaggaagtgtttaattatgtaaatatggcaca 623
Query: 1099 ccaagacaatatgtcaaatgttatgcaggaatctcaaatcaacagtaataatatgtttct 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccaagacaatatgtcaaatgttatgcaggaatctcaaatcaacagtaataatatgtttct 683
Query: 1159 ataccataatgacatacaactacagaaccggacttaatatatctcattgtctccctttat 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ataccataatgacatacaactacagaaccggacttaatatatctcattgtctccctttat 743
Query: 1219 ttaatgtgccatataatccaggacgaaacaaagaatctaacaatgtttaaacatcacaat 1278
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttaatgtgccatataatccaggatgaaacaaagaatctaacaatgtttaaacatcacaat 803
Query: 1279 actatgaataatttatatatattttctcattatagcaaatgaaaatgccaaagatttata 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 actatgaataatttatatatattttctcattatagcaaatgaaaatgccaaagatttata 863
Query: 1339 aataggtataagttacaatgtagttttttttttatatacaaaggctgatatggttggaaa 1398
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 864 aataggtataagttacaatgtag-tttttttttatatacaaaggctgatatggttggaaa 922
Query: 1399 cagattgttactgttataata 1419
|||||||||||||||||||||
Sbjct: 923 cagattgttactgttataata 943
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,040
Number of extensions: 6647
Number of successful extensions: 6647
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6646
Number of HSP's successfully gapped: 1
Length of query: 1588
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1571
Effective length of database: 8,119,229
Effective search space: 12755308759
Effective search space used: 12755308759
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)