BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03088 (UTR included)
(1672 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A1D02 1372 0.0
>BF01040A1D02
Length = 832
Score = 1372 bits (692), Expect = 0.0
Identities = 704/708 (99%)
Strand = Plus / Plus
Query: 491 ataagaaatcatgttgaagattctgttgtatctaagcctccttgtattctacgggaactg 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ataagaaatcatgttgaagattctgttgtatctaagcctccttgtattctacgggaactg 184
Query: 551 taaatacaacagctttaaaagtggagattttaaagatgcagctgagaaactaacatcaca 610
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 185 taaatacaacagctttaaaagtggagattttaaaaatgcagctgagaaactaagatcaca 244
Query: 611 aaagctctatgttccggatcctcccgaccataaaaagttggtggcaatggcgagatatgt 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aaagctctatgttccggatcctcccgaccataaaaagttggtggcaatggcgagatatgt 304
Query: 671 tctccataactgcaattgggcgtcaatagccacaatttcaactttacctgccatagaagg 730
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 305 tctccataactgcaattgggcgtcaatagccacaatttcaactttaccagccatagaagg 364
Query: 731 atttccattttcaaacgtgaaatctattgttgacggatctctagcgaattccactggaat 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atttccattttcaaacgtgaaatctattgttgacggatctctagcgaattccactggaat 424
Query: 791 cccatacttttatatgtcgccattggatttcactgctcgcgatctatcgaaagacatccg 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cccatacttttatatgtcgccattggatttcactgctcgcgatctatcgaaagacatccg 484
Query: 851 ctccacggtgctagtttctttagaggagacaagattttgcgaatttaagaaatacgaccc 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctccacggtgctagtttctttagaggagacaagattttgcgaatttaagaaatacgaccc 544
Query: 911 tgaagatccgaggtgcaccagattgatgttatcaggactaatgaagaaggttaaggaaaa 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgaagatccgaggtgcaccagattgatgttatcaggactaatgaagaaggttaaggaaaa 604
Query: 971 cacaccagaatacacattcgcaaaggctgcattattcgaaaggcacccggacatggcgaa 1030
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 605 cacaccagaatacacattcgcaaaggctgcactattcgaaaggcacccggacatggcgaa 664
Query: 1031 ctttccgcctgatcacaattggtttgtggctaaaatgaagatagcccaaatagctatggt 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctttccgcctgatcacaattggtttgtggctaaaatgaagatagcccaaatagctatggt 724
Query: 1091 cgattggttcggtggtgctaaatatgttcctgttaaagattacctcgcctacaattatac 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cgattggttcggtggtgctaaatatgttcctgttaaagattacctcgcctacaattatac 784
Query: 1151 tgggatggagatgttgcattaatttcacctttaacttataataaatga 1198
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tgggatggagatgttgcattaatttcacctttaacttataataaatga 832
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,776
Number of extensions: 5992
Number of successful extensions: 5992
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5992
Number of HSP's successfully gapped: 1
Length of query: 1672
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1655
Effective length of database: 8,119,229
Effective search space: 13437323995
Effective search space used: 13437323995
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)