BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03089 (UTR included)
(3241 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2E09 696 0.0
>BF01054B2E09
Length = 768
Score = 696 bits (351), Expect = 0.0
Identities = 357/359 (99%)
Strand = Plus / Plus
Query: 1013 ggctgaaggtttagtggaagcagagcctctcatgaaccacgtcgacggagaccacgagga 1072
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgaaggtttagtagaagcagagcctctcatgaaccacgtcgacggagaccacgagga 60
Query: 1073 cggacccaagcgttacatcgaagactatctgtggaacggccagaagccaggggtacagag 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggacccaagcgttacatcgaagactatctgtggaacggccagaagccaggggtacagag 120
Query: 1133 aaaatcgacgttccgtagcgcgctatcggccctcatatacaacggggaggatcggtccaa 1192
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaatcgacgttccgtagcacgctatcggccctcatatacaacggggaggatcggtccaa 180
Query: 1193 agataataggaaacgttacaaaagcgagtacaaaaagaaatttagaccgttctctcaata 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agataataggaaacgttacaaaagcgagtacaaaaagaaatttagaccgttctctcaata 240
Query: 1253 cgtgtacgaggcgtctaaagggacatttacaaaatgcagggggaaagggaagtcgataga 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtgtacgaggcgtctaaagggacatttacaaaatgcagggggaaagggaagtcgataga 300
Query: 1313 ggaggcgagcgagaggttggtgggggacacggagggtgcgggggcgggggccggggatg 1371
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaggcgagcgagaggttggtgggggacacggagggtgcgggggcgggggccggggatg 359
Score = 694 bits (350), Expect = 0.0
Identities = 359/362 (99%)
Strand = Plus / Plus
Query: 1371 ggggcggctgtcgaagacacggccagcacgctgcgcgctgccggcctgcagccactcgga 1430
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggggcgggcgtcgaagacacggccagcacgctgcgcgctgccggcctgcagccactcgga 466
Query: 1431 ctcgcgcagggcgactcctggtaccgcgaggtcctggatctgcgcaagcgtgccggcgaa 1490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ctcgcgcagggcgactcctggtaccgcgaggtcctggatctgcgcaagcgtgccggcgaa 526
Query: 1491 tacaagtaccgcggctggggaaccgaactcgctccagagcacatcactcagctttacaat 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tacaagtaccgcggctggggaaccgaactcgctccagagcacatcactcagctttacaat 586
Query: 1551 aagcaaatcgagctctggtaccaagtgtcccgccggtcgtcgctgtctgccctatcactc 1610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aagcaaatcgagctctggtaccaagtgtcccgccggtcgtcgctgtctgccctatcactc 646
Query: 1611 gcttccaccaatcacaaggctttgcctcgagatgagaaggacggcaaggagtcgagaaac 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 647 gcttccaccaatcacaaggctttgcctcgagatgagaaggacggcaaggagtccagaaac 706
Query: 1671 ctgtctcccaagaagttccggtctttccgctcggcaccgcaccaatccattcacgctaag 1730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ctgtctcccaagaagttccggtctttccgctcggcaccgcaccaatccattcacgctaag 766
Query: 1731 ct 1732
||
Sbjct: 767 ct 768
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 268,971
Number of extensions: 4709
Number of successful extensions: 4709
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4709
Number of HSP's successfully gapped: 2
Length of query: 3241
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3223
Effective length of database: 8,109,745
Effective search space: 26137708135
Effective search space used: 26137708135
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)