BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03091 (UTR included)
(3105 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B1B07 293 9e-79
BF01041B1F04 88 1e-16
>BF01022B1B07
Length = 706
Score = 293 bits (148), Expect = 9e-79
Identities = 198/215 (92%), Gaps = 7/215 (3%)
Strand = Plus / Plus
Query: 243 gccggtgcgaccgatacaaccacagcgaggtggagacggacgaggcggcggaggccggcg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gccggtgcgaccgatacaaccacagcgaggtggagacggacgaggcggcggaggccggcg 433
Query: 303 aggcgaccgaggcgcacgag-gacgaggccggcctcttcgccgccttctcctccacctcc 361
||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||
Sbjct: 434 aggcgaccgaggcgcacnagagacgaggccgnnntcttcgccgccttctcctccacctcc 493
Query: 362 cctcagtggcggcggcactattcccactcccactcccactct------cactcccactcc 415
|||||| || || || |||||||||||||||||||||||||| ||||||||||||
Sbjct: 494 cctcagaggaggaggaactattcccactcccactcccactctcactcccactcccactcc 553
Query: 416 cattcccactctcagtctcactcacagtccgcgat 450
|| ||||||||||||||||||||||||| ||||||
Sbjct: 554 cactcccactctcagtctcactcacagtacgcgat 588
>BF01041B1F04
Length = 676
Score = 87.7 bits (44), Expect = 1e-16
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 3062 ggagagcctccagctcctcgtcgggggagaagtaatgacggcag 3105
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagagcctccagctcctcgtcgggggagaagtaatgacggcag 44
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,393
Number of extensions: 4419
Number of successful extensions: 4419
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4411
Number of HSP's successfully gapped: 3
Length of query: 3105
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3087
Effective length of database: 8,109,745
Effective search space: 25034782815
Effective search space used: 25034782815
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)